Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0816 ATGGCCCAGCCTGTGGGCCCTCAAGCTGGGTGGGCTGTCCAGACAGGCTTACGCGAGCCGGCTAGGTGGGCTGCCCGGATTCCTCCATTGTGGAGGCAATATTTCCAAAACACTCAAGGTCTTATGTTTGTGGTGGATAACAATGATAGAGATCAAGTTGTTGAGGTCAGGAATGAGTTGCATAGGATGTTGAATGAAGATGAGCTCCATGATGCTGTGCTACTTGTATTTGATTCCAGAGCACCTGTGCAACCTCTAGTGAAGGGCTTTACGGGGGGATTGGATTGGCTCTTCAACAATAATGCTAACAAGGTATGA 318 0.4906 MAQPVGPQAGWAVQTGLREPARWAARIPPLWRQYFQNTQGLMFVVDNNDRDQVVEVRNELHRMLNEDELHDAVLLVFDSRAPVQPLVKGFTGGLDWLFNNNANKV* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0816 105 Gene3D - 22 83 IPR027417 -
Vvi1g0816 105 PANTHER ADP RIBOSYLATION FACTOR-RELATED 26 78 IPR024156 GO:0005525
Vvi1g0816 105 Pfam ADP-ribosylation factor family 26 78 IPR006689 GO:0003924|GO:0005525
Vvi1g0816 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 77 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0816 Vvi-Chr1 8325835 8331871 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0816 K07937 - dcr:108223243 99.3673