Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0806 ATGAGTCATCTGTTTCTGATTTTTTTGTACTCAGCTTTAGCTTTCAATGTTGCTTTGGGAGGAGGCAGTGAGGTTGCAGGCGAATCGCGGGACGGAGCAAACCCATTCACACCCAAAGCGGCTTTGGTTCGATATTGGAATAAGCAGATCGGCAGTGACTTGCAAAAGTCCACCTTTCTTCTCTCCAGGGCATCCCCATTGAGTGCAGTTGAGTCTGCAACTTTTACTAAACTTGCCGCTCAGAATGCCCTTTCCAACTACCTGCCGGCGTTCTGTAAGTCGGCGAATTTATTCTGCTTTCCTGATTTGGGGCAGAGTTTGGAGAAGCATGGACCCAATTCCAACTTCGCCGTCTACTCCAACAAGAACTTCACCAATTACGGAACTGGTGGACACGGAGGAACCGACTCTTTCAAGAACTACACCGACTACTTTCCGGTCGACTCATTCAGGAGGTACAGCCGTGATTCTGCCGGCCACAACGACAATTTCGATAATTATGGTCCCGAGGGCAATACAATGGATCTGAGTTTCAATGGTTATGGATCCGGAGCGACCCGCGGTGTCGGAGAGTTCAAGAAGTACAGCGAAGAATCCAATGTTCCCAACGTCCGATTCAACTCCTACAGTTCCGATGGCAATACCCGTAAACAATCGTTCAGGAGTTACTCCACAGAGAGCAATGCTGGGGATCAGTACTTCACCAGCTACGGCAAAAACAGCCAGGGATCTCCGAACGAGTTCACGAGTTATGGAGAGAACACCAACGTAATCGGATCCACATTCACCGGCTATGGTCGAACTGCCAACGCCGCCAACGATAAGTTCACCTCTTACGGCTTCGGCGGTAACGTACCAGTGAACAACTTCAAGAGCTACGGTGATGGCGGTAATTCAGGGATCGACACCTTTAAAAGTTACAGAAATCAATCCAACGTAGGAGACGACTCTTTCCGATCCTACGCCAAGAATTCCCACTCCGCGGAGGTGAATTTCGCTAATTATGGACAATCATTCAACGAAGGCACGGACACTTTCACTGGGTATGGCAAAGGGGCGACGGGCCACAAAATTGGGTTCAAGTTCTACGGCGTCAACAACACATTCACAGACTACGCTAAAAAGGGCATCTCCTTTTCAAGATACACTAACAAAAGCTCTGAAACCATGATTTCCACGGCTGCTAATGGCAGTTCCGTAAATAGGTGGATCGAGCCGGGTAAATTCTTCCGCGAGTCGATGCTGAAGAAGGGGACTGTGATGCCAATGCCGGACATTAGGGATAAAATGCCCAAAAGGTCGTTTTTGCCCCGCAGTATTTCCTCCAAATTACCGTTTTCAACCTCCAAACTCGAGGAGATGAAGAAAATATTCCATGCCGCGGATAACTCAAGCATGGAGCACATGTTCACAGAGGCATTGGATGATTGCGAGAGAGCACCCAGCAAAGGCGAGACCAGGCGCTGCGTCCCCTCCATCGAGGACATGATCGACTTCGCCACCACCGTCCTCGGCCGCAACGTTGTGGTTCGCACCACCCAATCCGTCGAAGGGTCAAAACAAAACGTAATGATCGGGTCGGTCAAAGGGATCAACGGTGGACAAGTCACCAAATCGGTGTCCTGCCACCAGAGCCTGTTCCCTTATCTACTCTATTACTGCCACTTCGTTCCCAAGGTTCGGGTCTATGAAGCGGACCTCCTGGACCCGAAAACCAAAGCCAACATTAACCATGGTGTTGCCATCTGTCACTTGGACACCTCCGATTGGAGCGCAGGTCATGGTGCATTCGTAGCATTGGGTTCGGGCCCTGGCCGGATTGAAGTTTGTCACTGGATCTTCGAGAATGATATGACCTGGACCATTGTAGACTGA 1875 0.4997 MSHLFLIFLYSALAFNVALGGGSEVAGESRDGANPFTPKAALVRYWNKQIGSDLQKSTFLLSRASPLSAVESATFTKLAAQNALSNYLPAFCKSANLFCFPDLGQSLEKHGPNSNFAVYSNKNFTNYGTGGHGGTDSFKNYTDYFPVDSFRRYSRDSAGHNDNFDNYGPEGNTMDLSFNGYGSGATRGVGEFKKYSEESNVPNVRFNSYSSDGNTRKQSFRSYSTESNAGDQYFTSYGKNSQGSPNEFTSYGENTNVIGSTFTGYGRTANAANDKFTSYGFGGNVPVNNFKSYGDGGNSGIDTFKSYRNQSNVGDDSFRSYAKNSHSAEVNFANYGQSFNEGTDTFTGYGKGATGHKIGFKFYGVNNTFTDYAKKGISFSRYTNKSSETMISTAANGSSVNRWIEPGKFFRESMLKKGTVMPMPDIRDKMPKRSFLPRSISSKLPFSTSKLEEMKKIFHAADNSSMEHMFTEALDDCERAPSKGETRRCVPSIEDMIDFATTVLGRNVVVRTTQSVEGSKQNVMIGSVKGINGGQVTKSVSCHQSLFPYLLYYCHFVPKVRVYEADLLDPKTKANINHGVAICHLDTSDWSAGHGAFVALGSGPGRIEVCHWIFENDMTWTIVD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0806 624 SMART BURP_2 407 623 IPR004873 -
Vvi1g0806 624 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 24 624 - -
Vvi1g0806 624 ProSiteProfiles BURP domain profile. 409 623 IPR004873 -
Vvi1g0806 624 Pfam BURP domain 409 621 IPR004873 -
Vvi1g0806 624 MobiDBLite consensus disorder prediction 203 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0806 Vvi-Chr1 8209643 8211609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0806 - - vvi:100248300 1284.63