Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0805 ATGGCTGAATCAAAATCTGGATTGAGGAAGCCTGTGTTCACCAAGATTGAACAGCTTCGCCCGGGTACTAGTGGGCATACTCTCACGGTAAAAGTTGTTAGTTCTAAGATGGTGCTGCAAAAGGGTCGTCCAGATGGTCCTCAGGTGCGTCAAATGCGGATTGCAGAATGCTTGGTAGGAGATGAGACCGGAATGATTATTTTTACAGCGAGGAATGATCAAGTGGACTTGATGAAAGAGGGTAGCACTGTGGTCCTCCGCAATGCAAAAATCGACATGTTCAAGGGCTCAATGAGGCTTGCTGTGGACAAGTGGGGTCGTGTGGAAGTCACTGAACCTGCCAGTTTCTCTGTGAAGGAAGATAACAATCTTTCCCTAGTTGAATATGAACTTGTGAATGTTGTTGAAGAGTGA 414 0.4614 MAESKSGLRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLSLVEYELVNVVEE* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0805 137 CDD SoSSB_OBF 27 110 - -
Vvi1g0805 137 FunFam Uncharacterized protein At4g28440 23 126 - -
Vvi1g0805 137 Gene3D - 23 126 IPR012340 -
Vvi1g0805 137 PANTHER OS05G0244600 PROTEIN 3 135 - -
Vvi1g0805 137 SUPERFAMILY Nucleic acid-binding proteins 4 134 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0805 Vvi-Chr1 8197152 8201664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0805 - - vvi:100265381 239.195