Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0803 ATGGTGAACAATAAGGAGACAAGTATGGTGGCTTCTCTACTTGCCGTTATGGCAGTTGTTCTCAGTTTTTTCAGTATTGCCCAAGCTGCTGCAAAAGTCCCTACTGTTATTGTTGTTGGAGCCGGCATGTCAGGGATATCGGCGGCAAAAACGTTATCAGATGCAGGAATAAAGAATATATTGATACTGGAAGCAACCGATAGAATCGGAGGACGCATCCACAAAACAAACTTTGCGGGGTTGTCAGTGGAAATGGGAGCAAACTGGGTGGAAGGGGTTGGGGGTTCTGAAATGAATCCCATTTGGGAAATGGTGAACAAGATCAAACTTAAAACATTTTTTTCCGACTATGATAACGTATCCTCTAACACCTACAAACAAGTGGGTGGACTTTATGCGGAGTCTGTAGCCCAGCATCTGTTGGACTCGCTGGATAATGTGGTCGAGTTCAGCGAAAATCTTTCTACCCTTCTGACAGCAAAGAAACAAGAGGATATCTCCGTCTTAACAGCGCAACGCCTTAAGAATCGTGTTCCTTCCACACCCCTTGAGATGGCCATTGACTACTACAACTACGATTACGAGTTTGCAGAGCCACCACGAGTAACTAGCTTGCAGAACACGGCCCCGTTGCCCACATTTGCCAACTTCGGAGAGGATCTCTACTTTGTTGGAGATTCTAGGGGTTACGAGAGTGTTGTTCATTACGTGGCCAAACAATTCCTCACCACCAATAAAGATGGACAAATCACTGATCCTCGCCTCCTACTTAACAAGGCAGTGGTTCAGATAACTTACTCACCGAGTGGTGTAATCATTAAGACGGAGGATGGGTCGGTTTACAGAGCTGAATATGTGATGCTCTCACCCAGCATTGGTGTACTTCAGTCTACTCTCATCGACTTCAAGCCTGATTTGCCGCCATGGAAGATCCTTGCTATCTACCAGTTTGATATGGCTGTCTATACCAAGATATTCCTCAAGTTTCCTTACAAATTCTGGCCCGCTGGCAATGGCACTGAGTTCTTCTTGTATGCCCATGAAAAGCGTGGTTACTACACAATCTGGCAGCAATTGGAGAGGGAGTACCCCGGTTCAAATGTTCTTCTAGTGACAGTTACTGATGATGAATCAAAGAGGATAGAGCAGCAACCTGATTCTGATACCAAGGCCGAGGTCATGGGTGTCCTAAGAGCCATGTTCGGAAAGAACATTCCGGAAGCTACGGATATATTAGTGCCTAGATGGTGGTCTAACAAGTTCTACAAAGGCACTTTCTCCAATTGGCCAATTGGGGTTAGCCGATTTGAGTTTGATCAGATTAGGGCACCTGTTGGAAGGGTTTACTTCACAGGCGAACACACCAGCCAACACTACAATGGTTACGTTCACGGTGCCTACCTTGCAGGAATTGACTCAGCAAATATATTGATTCCCTGCATCAAAAAGGGAGCTTGCACTTACCACGTCCAACCAAAAGGAACTTAA 1488 0.4563 MVNNKETSMVASLLAVMAVVLSFFSIAQAAAKVPTVIVVGAGMSGISAAKTLSDAGIKNILILEATDRIGGRIHKTNFAGLSVEMGANWVEGVGGSEMNPIWEMVNKIKLKTFFSDYDNVSSNTYKQVGGLYAESVAQHLLDSLDNVVEFSENLSTLLTAKKQEDISVLTAQRLKNRVPSTPLEMAIDYYNYDYEFAEPPRVTSLQNTAPLPTFANFGEDLYFVGDSRGYESVVHYVAKQFLTTNKDGQITDPRLLLNKAVVQITYSPSGVIIKTEDGSVYRAEYVMLSPSIGVLQSTLIDFKPDLPPWKILAIYQFDMAVYTKIFLKFPYKFWPAGNGTEFFLYAHEKRGYYTIWQQLEREYPGSNVLLVTVTDDESKRIEQQPDSDTKAEVMGVLRAMFGKNIPEATDILVPRWWSNKFYKGTFSNWPIGVSRFEFDQIRAPVGRVYFTGEHTSQHYNGYVHGAYLAGIDSANILIPCIKKGACTYHVQPKGT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0803 495 SUPERFAMILY FAD/NAD(P)-binding domain 34 479 IPR036188 -
Vvi1g0803 495 Pfam Flavin containing amine oxidoreductase 43 477 IPR002937 GO:0016491
Vvi1g0803 495 PANTHER FLAVIN MONOAMINE OXIDASE 34 484 - -
Vvi1g0803 495 FunFam Polyamine oxidase 1 310 434 - -
Vvi1g0803 495 Gene3D - 36 476 IPR036188 -
Vvi1g0803 495 Gene3D - 116 434 - -
Vvi1g0803 495 SUPERFAMILY FAD-linked reductases, C-terminal domain 319 427 - -
Vvi1g0803 495 PRINTS Flavin-containing amine oxidase signature 428 450 IPR001613 GO:0016491
Vvi1g0803 495 PRINTS Flavin-containing amine oxidase signature 459 476 IPR001613 GO:0016491
Vvi1g0803 495 PRINTS Flavin-containing amine oxidase signature 35 54 IPR001613 GO:0016491
Vvi1g0803 495 PRINTS Flavin-containing amine oxidase signature 210 232 IPR001613 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0803 Vvi-Chr1 8170639 8175052 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0803 K13366 - vvi:100241347 988.408