Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0800 ATGTTTGGGAAACAAATTCCAGAAGCTACAGATATATTAGTCCCTAGATGGTGGTCAAACAGATTCTACAAGGGCAGTTACTCCAACTGGCCAATTGGAGTTGGTCATCACCAATTCAATCAGATAAAGGCACCGGTTGGAAGAGTATATTTCACAGGCGAACACACTAGTGCAGCCTACTATGGTTATGTTCATGGCGCCTACTTTGCAGGTATTGACTCTGCAAAAATGATTACCAACTGCATCAAGAGAGGAGCTTGCACTAACAAAATCTGA 276 0.4239 MFGKQIPEATDILVPRWWSNRFYKGSYSNWPIGVGHHQFNQIKAPVGRVYFTGEHTSAAYYGYVHGAYFAGIDSAKMITNCIKRGACTNKI* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0800 91 PANTHER FLAVIN MONOAMINE OXIDASE 1 85 - -
Vvi1g0800 91 Pfam Flavin containing amine oxidoreductase 1 77 IPR002937 GO:0016491
Vvi1g0800 91 Gene3D - 32 88 IPR036188 -
Vvi1g0800 91 SUPERFAMILY FAD/NAD(P)-binding domain 42 81 IPR036188 -
Vvi1g0800 91 Gene3D - 1 31 - -
Vvi1g0800 91 SUPERFAMILY FAD-linked reductases, C-terminal domain 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0800 Vvi-Chr1 8106260 8107306 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0800 K13366 - vvi:100244793 179.104