Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0795 ATGTCTGGAAAACTTAGAAAGTGTGTGATGCTATGTTGTGGAGGAAAGCCCCCAAGTAAAGATATGGCGACTGATTCATGCGAGGACGCCATTGCAGAACTGCAGAAACTTCTCAGCGAGAAATGTGGCCTCGAAACCGTCGCCGCCGCAAAAATCAAGCAGATAACGGCCGAGTTAGAGAAAACCGGTTCCGAACCGTTTGATGCAGTTGAAAGGATAAAAACCGGGTTCGGTCGCTTCAAGACAGAGAAATACGAGAAGAATCCTACTTTGTACGACGAGCTTGCCAAAGGCCAGAGCCCCAAGTTTATGGTGTTCGCCTGCTCAGACTCTCGAGTTTGCCCTTCACATATCCTGGATTTTCAGCCAGGGGAGGCATTTATGGTCCGAAACATTGCGAACATGGTTCCGCCATATGATCAGACCAAATACTCTGGAGTTGGGGCGGCCATTGAATATGCAGTATTGCATCTGAAGGTGGAGAATATTGTAGTCATTGGACACAGCTGTTGTGGAGGGATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACTGCTAGTGACTTCATAGAACAGTGGGTCCAAATCTGTTTACCTGCCAAGTCCAAGGTGAAAACAGAATACACTGATCTGACTTTCGCGGAGCAGTGCACTAACTGTGAGAAGGAGGCTGTGAATGTATCCCTGGGAAACCTGTTAACCTACCCATTTGTCAGAGAAGCTGTGGTGAAGAAAACCCTAGCTCTGAAGGGTGCACACTACGATTTTGTCAACGGATCTTTTGAGCTCTGGAGTTTTGAAGTCAACCTTTCCCCCCCTCTACCTGCGTGA 834 0.4808 MSGKLRKCVMLCCGGKPPSKDMATDSCEDAIAELQKLLSEKCGLETVAAAKIKQITAELEKTGSEPFDAVERIKTGFGRFKTEKYEKNPTLYDELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFMVRNIANMVPPYDQTKYSGVGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICLPAKSKVKTEYTDLTFAEQCTNCEKEAVNVSLGNLLTYPFVREAVVKKTLALKGAHYDFVNGSFELWSFEVNLSPPLPA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0795 277 SMART Pro_CA_2 96 266 IPR001765 GO:0004089|GO:0008270
Vvi1g0795 277 CDD beta_CA_cladeB 76 265 IPR045066 GO:0004089|GO:0008270
Vvi1g0795 277 SUPERFAMILY beta-carbonic anhydrase, cab 69 272 IPR036874 GO:0004089|GO:0008270
Vvi1g0795 277 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 152 172 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vvi1g0795 277 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 108 115 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vvi1g0795 277 PANTHER CARBONIC ANHYDRASE 53 268 IPR001765 GO:0004089|GO:0008270
Vvi1g0795 277 FunFam Carbonic anhydrase 58 276 - -
Vvi1g0795 277 Gene3D Carbonic anhydrase 59 275 IPR036874 GO:0004089|GO:0008270
Vvi1g0795 277 Coils Coil 20 40 - -
Vvi1g0795 277 Pfam Carbonic anhydrase 104 261 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0795 Vvi-Chr1 8061586 8071016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0795 K01673 - vvi:100852632 566.614