Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0791 ATGGAGCGTGTTGGTGCCGAGGAACAAGTCTCAATGACTGTGGACGACCTTGAAATCATCCGCCCCGAGGCAGAATCCGATGAATTCAGTTCTAGTTCAGAGCGAGTCGATTTGTTTGCTTGGAACAACGGAATGATCAGAGTTGATGAAGGAAATACAGAGCACGACGCCATCAAGAAGATGTTTTTTTCCGGCATGGGACCGATCGGGAAGGGTACGGATGTTGTGTCTATACACAAGAATTCGCATTCTACTTTAACCGGCCAAGCGCGATTTGAATCGTTTCGAATATTTTCGCAGGCGGTGGGGAAAAAGTGCGGTGGTGATGCTAATATCAACTATGCCTGGTATGGCGCCTCCAGGGGTGAAATCTATGATATTATATCTCATGGATTTAGCCGACTTCAACGGCCAAAAGCTGGTGAACTATATGGTTTTGGGGTATATCTATCTTCTGCAAAGTTTTCCATTGATTGTGCATTATCTTCAGCAGAGGATGAAAATGGGCTTAGGCATGTGATGTTATGTCGCGTGATATTGGGCAACATGGAAACTGTTTGTGCTGGTTCACAACAGTTTCATCCATGCTCTAGGGAGTATGACTCTGGAGTGGATGATGTTTCAGCGCCTAGAAGATATATCATTTGGAGTGCTTACATGAATTCTCACATTCTTCCCAGTTACATCATAAGCTTTAGGGCCCCTCTGAAGGGAGTTCCTCGAAGAATTCAGGCGAATTTAGTAAAACCCACCTCCCCATGGATGAAGTTTCACACTCTATTGTCCGTACTTTCAAAGGTTTTACCTCCTCACAAGATGACCCAGATTTCCAAATATCACTGTGATTTCCATAGGAAAAAAATTACGAGGCAGCAACTGGTAAAAAGATTAAGACAGATAGCCGGAGACGAGATGTTAACCAGAGTGATCAAACTTTACAGAACTAAGGATCAGACCTCCTGTGTGCTAGTTCCATGA 978 0.4407 MERVGAEEQVSMTVDDLEIIRPEAESDEFSSSSERVDLFAWNNGMIRVDEGNTEHDAIKKMFFSGMGPIGKGTDVVSIHKNSHSTLTGQARFESFRIFSQAVGKKCGGDANINYAWYGASRGEIYDIISHGFSRLQRPKAGELYGFGVYLSSAKFSIDCALSSAEDENGLRHVMLCRVILGNMETVCAGSQQFHPCSREYDSGVDDVSAPRRYIIWSAYMNSHILPSYIISFRAPLKGVPRRIQANLVKPTSPWMKFHTLLSVLSKVLPPHKMTQISKYHCDFHRKKITRQQLVKRLRQIAGDEMLTRVIKLYRTKDQTSCVLVP* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0791 325 ProSiteProfiles PARP catalytic domain profile. 30 255 IPR012317 GO:0003950
Vvi1g0791 325 Gene3D - 43 234 - -
Vvi1g0791 325 Pfam Poly(ADP-ribose) polymerase catalytic domain 100 188 IPR012317 GO:0003950
Vvi1g0791 325 ProSiteProfiles RST domain profile. 248 319 IPR022003 -
Vvi1g0791 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 26 315 IPR044964 -
Vvi1g0791 325 SUPERFAMILY ADP-ribosylation 45 236 - -
Vvi1g0791 325 Pfam RCD1-SRO-TAF4 (RST) plant domain 249 314 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0791 Vvi-Chr1 8010396 8012111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0791 - - vvi:100852765 654.44