Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0783 ATGATCGGAGTTCCCAATGAAGTCCTCCCTTCTCTGGCAACCGGCACCGTCAATGTCTCGCTGGACTGGCTTCAATCCAACATTTTCGCATATGTTTCCTCCGATCAAGTCAGGTACATCGCCGTCGGCAACGAGGTCTTCCTTAAGGATCCGTTCTACACTCCCTACGTACTTCCTTCCATCATCAGCCTCTACCAAGCTCTCCAAATCCTAGGTTTGGCAGACAAAATAAAGGTGTCGTCGCCACACGCAGCGTCCGTACTCTCCAGTTCGTCCCCTCCCTCTACCGGAACCTTCGATCCCTACCTCCGATCCGTCATGGTCCCGTACCTCCAGTTCCTGGAGGACCACGGATCACCGTTCCTGTTGAACGTGTATCCGTACATCAGCTACATCAGGAACAAACAGTACATATCCTTGGACTACGCACTATTCGGATCGGGAACTACAGTTCAAGATGGCGCATTGACATACACAAACCTGTTCGACGCATCGGTGGACGCTTTCGTTTGGGCCATGGAAAGAGAAGGATTCGGCGGAGTGGCGGTAGTGGTGGCGGAGACAGGGTGGCCGAGGGACGGGGGTGACGCGGCAACGCCGGAGAATGCGTTGGCTTATAACAACAATGTGATTAGACGGGCACGGAACTCGGTTGGAACGCCTAAAAGGCCTGGGGTTGGGGTTGAAGTGTTCGTGTTTGACCTGTTTGATGAGAACCTCAAGAGCGGGGATGAGTATGAGAGGCACTTTGGGATCTTTGGACTTGATGGTGCCAAGGCTTATGACCTAAGTTTCAATTGA 801 0.5281 MIGVPNEVLPSLATGTVNVSLDWLQSNIFAYVSSDQVRYIAVGNEVFLKDPFYTPYVLPSIISLYQALQILGLADKIKVSSPHAASVLSSSSPPSTGTFDPYLRSVMVPYLQFLEDHGSPFLLNVYPYISYIRNKQYISLDYALFGSGTTVQDGALTYTNLFDASVDAFVWAMEREGFGGVAVVVAETGWPRDGGDAATPENALAYNNNVIRRARNSVGTPKRPGVGVEVFVFDLFDENLKSGDEYERHFGIFGLDGAKAYDLSFN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0783 266 SUPERFAMILY (Trans)glycosidases 1 264 IPR017853 -
Vvi1g0783 266 Gene3D Glycosidases 1 266 - -
Vvi1g0783 266 Pfam Glycosyl hydrolases family 17 2 265 IPR000490 GO:0004553|GO:0005975
Vvi1g0783 266 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 263 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0783 Vvi-Chr1 7959466 7960266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0783 1 265 Glycoside Hydrolase AT4G16260 43.609 7.25e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0783 - - vvi:100854022 498.049