Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0782 ATGTTCAAGGAGTATTTCTCTGAGATGCCATGGCTTGCAATACCATTTTCTGATTCAGATACACGCGATCATTTGGATGAACTATTTAGGGTGAGTGGTATTCCACACCTTGTGATCATTGGTGAAAATGGGAAGGTTTTGACTGATAGTGGGGTTGAGATTATACGAGAGTATGGAGTGGAAGGTTTTCCTTTTACTTCAGAGAGGATTAAAGAATTAAAAGAGCAGGAGGAAGTGGCCAAGAGGGAACAGTCCTTGAGATCCATCTTAGTCTCCGACTCACGTGATTTCGTAATTTCAGCCAATGGAATGAAAGTACCTATCTCTAAGCTTGAAGGGAGGTTGGTGGGGCTTTATTTCTCATTATCTTCGTACAAATTATGTGTTGATTTTACTTCAAAACTAGTGGATGTTTATGCTAAGGTGAAAGCAATGGGGGAGAGCTTTGAAATTGTCTTGATATCATTTGATGATGATGAAGAATCATTCAATGAAGGATTTGGAAGCATGCCTTGTTTTGCATTGCCCTTCAAGGATGAGAGCTGTAGGAAGCTGGCTAGGTACTTTGAACTCTCGACAGTACCCACTTTGGTTATGATTGGGCCAGATGGAAAAACACTCCATTCCAATGTTGTAGAAGCCATTGAAGAGTATGGGATTCAGGCATACCCTTTTACCCCTGCAAAGTTTGCAGAGCTTGAGGAGATAGAGAAGGCAAAACAGGAAGCACAGACTCTAGAGTCAATTTTGGTTTCAGGGAATCGAGATTATTTGATTGGGAAACATGGGGTCAAGGTTCCAGTGTCTGATCTTGTGGGTAAGAACATCCTCCTATATTTCTCAGCACATTGGTGCTCTCCATGCCGTGCTTTTCTGCCAAAACTTACTGACGCATATCACAAGATTAAGGCCAAGGACAGTGGTTTTGAAGTGATTTTCATCTCTAGCGATAGGGACCAGACCTCCTTTGATGATTTCTTTTCTGAAATGCCATGGCTGGCACTTCCCTTTGGCGATGAGAGGAAGGAATCTTTAAGCAAGATGTTCAAGGTCCAGGGCATCCCCAAGGTTGTGGCCATTGGACCAACTGGCCGGACTATTACAACACAAGCCAGAGACCTTGTAGCCGATCATGGGGCCGATGCCTATCCTTTCACTGATGAACGTTTACAGGAGATAGAGGCACAATATGAGATGGCAAAGGGGTGGCCTGATAAGCTGAGCCATGCTCTTCATGAGGAGCACGAGCTTGCGCTCACTCAACATCAGATTTATAAGTGCGACGGGTGTGATGAGGAAGGACATGCGTGGGCTTTCAGTTGTGAAGAATGTGACTTTGATCTCCATCCAAAGTGTGCTTTGGAAGACGGCAAAGGAACTGAAGATGATGCAATGGATGAGGAAAAACCAGAAGAAGGATGGATATGCGACGGGAAAGTCTGTTTCAAAGCTTGA 1455 0.4399 MFKEYFSEMPWLAIPFSDSDTRDHLDELFRVSGIPHLVIIGENGKVLTDSGVEIIREYGVEGFPFTSERIKELKEQEEVAKREQSLRSILVSDSRDFVISANGMKVPISKLEGRLVGLYFSLSSYKLCVDFTSKLVDVYAKVKAMGESFEIVLISFDDDEESFNEGFGSMPCFALPFKDESCRKLARYFELSTVPTLVMIGPDGKTLHSNVVEAIEEYGIQAYPFTPAKFAELEEIEKAKQEAQTLESILVSGNRDYLIGKHGVKVPVSDLVGKNILLYFSAHWCSPCRAFLPKLTDAYHKIKAKDSGFEVIFISSDRDQTSFDDFFSEMPWLALPFGDERKESLSKMFKVQGIPKVVAIGPTGRTITTQARDLVADHGADAYPFTDERLQEIEAQYEMAKGWPDKLSHALHEEHELALTQHQIYKCDGCDEEGHAWAFSCEECDFDLHPKCALEDGKGTEDDAMDEEKPEEGWICDGKVCFKA* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0782 484 Pfam C1 domain 411 453 IPR004146 -
Vvi1g0782 484 CDD TryX_like_TryX_NRX 256 385 IPR045870 GO:0004791
Vvi1g0782 484 Coils Coil 236 256 - -
Vvi1g0782 484 SUPERFAMILY Cysteine-rich domain 403 454 IPR046349 -
Vvi1g0782 484 SUPERFAMILY Thioredoxin-like 99 208 IPR036249 -
Vvi1g0782 484 ProSiteProfiles Thioredoxin domain profile. 235 395 IPR013766 -
Vvi1g0782 484 Pfam Thioredoxin-like 2 46 IPR012336 -
Vvi1g0782 484 Pfam Thioredoxin-like 113 205 IPR012336 -
Vvi1g0782 484 Pfam Thioredoxin-like 274 365 IPR012336 -
Vvi1g0782 484 Gene3D Glutaredoxin 248 387 - -
Vvi1g0782 484 Gene3D Glutaredoxin 89 226 - -
Vvi1g0782 484 Gene3D Glutaredoxin 1 67 - -
Vvi1g0782 484 SUPERFAMILY Thioredoxin-like 258 370 IPR036249 -
Vvi1g0782 484 PANTHER THIOREDOXIN 206 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0782 Vvi-Chr1 7954942 7956741 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0782 K17609 - vvi:109122684 988.408