Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0781 ATGGCTACTGATAAAATCGATGGCGTTTCTCACGATTTGGTTTTGCTCCTCACTAGTGAGGATCGGGACTTCCTTGTCCGTAATAATGGCCACCAGGTTAAAGTAGAGAGTTTGAAGGGGAAGAAAATTTGGCTATATTTTTCAGCATCATGGTGTGGGCCATGTCGGCAATTCACCCCTAAATTAGTAGAGGTGTACGATGAATTCTCCTCCAAAGGCGATTTTGAAATCATCTTTGTTTCACTTGACAAAGGCGATCAGTTGTTCAATGAATATTTCTCCAAGATGCCCTGGCTTGCAATCCCATTTTCTGATTCGGACACGCGTGATCACTTGAAGAAATTGTTCAAGATGAGGGGGATTCCAAGCCTTGCGATGCTTGATGAATCTGGCAAGGTTTTGAGCAGTGAGGGAGTTGAGATCATAAAAGATTATGGAGTGGAAGGGTATCCTTTCACAGCTGAAAAGATCAAAGAACTGAAGGAAAAGGAAGAAACAGCCAAGAAGGAACAATCCTTGAGATCCATCTTGGTTTCACAATCCCGTGACTATGTTATTTCAGCTGATGGAAGGAAGGTATCCGTGTCTGAATTAGAAGGGAAGTTAGTGGGACTGTATTTCTCATTGTCCTCCTACAACGCATGCCAGGAATTTACTACAACACTGGCGGAAGTTTATGAGGAACTAAGGGCAAAGGGGGAGAGCTTTGAAATAGTCATGATATCGCTTGATGATGAGGAACAATCATTCAAAAAATACTTTGAAAGCATGCCTTGGTTTGCGTTGCCTTTCAATGACAAGAGCTGCGGGAAACTGGCTCGCTACTTTAAGCTCAGAGTCCTACCCACTTTGGTTGTTATTGGGCAAGATGGAAAGACTCTCCATTCCAATGTTGCCGAAGCTATTGAGCAACATGGGATTCAGGCATACCCTTTTACACCAGAGAAGTTTGTGGAGCTCGAGGAGATTGAGAAGGCAAAACGAGAAGCGCAGACGCTTGAGTCAATTTTGGTTTCAGGGGACACAGATTTTGTGATTGGGAAAGATGGAGTCAAGATTCCAGTGTCTCACCTAGCAGGGAAGAACATCCTCCTATATTTCTCAGCACATTGGTGCCCCCCATGCCGCGCTTTCCTACCAAAACTTATAGAAGCATACCAGAATATTAAGGCAAAGGATGAAGCATTCGAAGTGATTTTCATCTCTAGTGACAGGGATCAGGCCTCCTTTGATGAATTCTTTTCAGGTATGCCATGGCTGGCACTTCCCTTTGGGGACAAAAGGAAAGCTTCCTTGGGTCGCACCTTCAAGGTCAGGAGCATCCCCAAGCTCATAGCCGTTGAACCAACGGGCCGGACAGTGACAACAGAAGCCAGAAATCTTGTTATGATTCATGGGGCTGATGCTTATCCCTTCACTGATGAACATATAAAGGAGATCGAAGCGCGGTATGAGGAGATGGCAAAGGGGTGGCCAGCGAAGGTGAAGCACGCCCTTCACGAACAGCATGAGCTTGTGCTCACTAAGCATCGCATGTATAGATGTAATGGGTGTGAGAAGGAGGGACATTTGTGGTCATTCTATTGTGCAGAATGTGATTTCGACCTCCATCCCAAGTGCGCACTAGACGAAGACAAAGGAATCAAAGATGATAATAAATTGGAGAAAGCAAAACCTGGTGAAGGATGGAAATGTGATGGGGAAGTATGCTCCAGAGCTTGA 1722 0.4501 MATDKIDGVSHDLVLLLTSEDRDFLVRNNGHQVKVESLKGKKIWLYFSASWCGPCRQFTPKLVEVYDEFSSKGDFEIIFVSLDKGDQLFNEYFSKMPWLAIPFSDSDTRDHLKKLFKMRGIPSLAMLDESGKVLSSEGVEIIKDYGVEGYPFTAEKIKELKEKEETAKKEQSLRSILVSQSRDYVISADGRKVSVSELEGKLVGLYFSLSSYNACQEFTTTLAEVYEELRAKGESFEIVMISLDDEEQSFKKYFESMPWFALPFNDKSCGKLARYFKLRVLPTLVVIGQDGKTLHSNVAEAIEQHGIQAYPFTPEKFVELEEIEKAKREAQTLESILVSGDTDFVIGKDGVKIPVSHLAGKNILLYFSAHWCPPCRAFLPKLIEAYQNIKAKDEAFEVIFISSDRDQASFDEFFSGMPWLALPFGDKRKASLGRTFKVRSIPKLIAVEPTGRTVTTEARNLVMIHGADAYPFTDEHIKEIEARYEEMAKGWPAKVKHALHEQHELVLTKHRMYRCNGCEKEGHLWSFYCAECDFDLHPKCALDEDKGIKDDNKLEKAKPGEGWKCDGEVCSRA* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0781 573 SUPERFAMILY Thioredoxin-like 185 296 IPR036249 -
Vvi1g0781 573 ProSiteProfiles Thioredoxin domain profile. 13 162 IPR013766 -
Vvi1g0781 573 SUPERFAMILY Cysteine-rich domain 490 542 IPR046349 -
Vvi1g0781 573 SUPERFAMILY Thioredoxin-like 25 134 IPR036249 -
Vvi1g0781 573 ProSiteProfiles Thioredoxin domain profile. 322 482 IPR013766 -
Vvi1g0781 573 SUPERFAMILY Thioredoxin-like 346 455 IPR036249 -
Vvi1g0781 573 Pfam Thioredoxin-like 200 292 IPR012336 -
Vvi1g0781 573 Pfam Thioredoxin-like 41 133 IPR012336 -
Vvi1g0781 573 Pfam Thioredoxin-like 361 452 IPR012336 -
Vvi1g0781 573 Pfam C1 domain 499 541 IPR004146 -
Vvi1g0781 573 ProSitePatterns Thioredoxin family active site. 364 382 IPR017937 -
Vvi1g0781 573 Gene3D Glutaredoxin 175 313 - -
Vvi1g0781 573 Gene3D Glutaredoxin 16 154 - -
Vvi1g0781 573 Gene3D Glutaredoxin 338 474 - -
Vvi1g0781 573 CDD TryX_like_TryX_NRX 23 152 IPR045870 GO:0004791
Vvi1g0781 573 CDD TryX_like_TryX_NRX 343 472 IPR045870 GO:0004791
Vvi1g0781 573 PANTHER THIOREDOXIN 8 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0781 Vvi-Chr1 7943322 7945580 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0781 K17609 - vvi:100852797 1150.96