Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0773 ATGGAAGCGCGGTGTTCTGGAATTGAAAGGAATTCGGAGGACGGAGGTTCCAAAGCTCTCGCTCCTGATGAAATTTCGCATTTGGCTCTGGACATTGGAGGCACTCTGATTAAGTTGGTGTATTTCTCAAGGAATGATAGCTGGTCGGTTGATGATAAAGGGGCAAAGTCTCCAAAGGGGGATTCTCCTTTGCGAGTTTCTTGTAGTAATCTAGACTATCCTATTCTTTACGGAAGGATCCATTTTGCAAAGTTTGAGACAATCAAAGTCAATGAATGCCTAGAGTTTATTCGTTCGAAGAAGCTTCTCCATGGTGGTTGTTGGCATCATGAAGCTCCTGTCTCTGACAAGAATGTTATTAAGGCCACAGGCGGTGGGGCATATAAGTTTGCTGATCTCTTCAAAGAGAATCTTGGGCTCAATCTTGACAAGGAAGATGAAATGGATTGTCTTGTTAGTGGAGCAAATTTTCTGCTTAAGGCAGTTCACCATGAAGCCTTTACATATATGGATGGCCAGAAGGAATTTGTGCAGATTGATCATAACGATTTGTATCCCTACCTGCTTGTTAATATTGGGTCTGGTGTTAGCATGCTCAAGGTGGATGGAGATGGCAAGTTTGAACGAGTTAGTGGAACAAATGTAGGTGGTGGCACTTTTTGGGGCTTGGGAAGGCTTCTAACGAAGTGCAAGAGTTTTGATGAGTTGCTTGAGTTGAGCCATCAGGGAAATAATAGAGTGATAGACATGCTTGTTGGAGATATCTACGGTGGAATGGACTATTCGAAGTTTGGTCTTGCATCAACAACCATTGCTTCTAGCTTTGGCAAGGCAATTTCTGAAAATAAAGAGCTTGAGGATTACAGACCTGAAGATGTTGCTCGCTCTCTCTTGCGAATGATTTCTAACAATATTGGGCAGATATCTTATTTGAATGCACTTCGATTTGGGCTCAAGAGGATATTTTTTGGAGGATTTTTCATCCGGGGTCATGCTTATACAATGGATACAATTTCTGTTGCAGTTAATTTTTGGTCGAAAGGTGAAGCAAAAGCAATGTTTTTGCGGCATGAAGGATTTCTAGGGGCATTGGGTGCATTCATGAGCTATGAAAAGAATAATTATGATGGCTTGATGGTTCATCAGTTAGTGGAACAGGTCTCAACCAGTGCATCTTACTCTGGGGATAAGATTCACAGCTCACTAGCTGGGGATTTGAATGACAGTGAAAGTATAGGTTGCAGTGTCTATACAACTTAG 1260 0.4198 MEARCSGIERNSEDGGSKALAPDEISHLALDIGGTLIKLVYFSRNDSWSVDDKGAKSPKGDSPLRVSCSNLDYPILYGRIHFAKFETIKVNECLEFIRSKKLLHGGCWHHEAPVSDKNVIKATGGGAYKFADLFKENLGLNLDKEDEMDCLVSGANFLLKAVHHEAFTYMDGQKEFVQIDHNDLYPYLLVNIGSGVSMLKVDGDGKFERVSGTNVGGGTFWGLGRLLTKCKSFDELLELSHQGNNRVIDMLVGDIYGGMDYSKFGLASTTIASSFGKAISENKELEDYRPEDVARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISVAVNFWSKGEAKAMFLRHEGFLGALGAFMSYEKNNYDGLMVHQLVEQVSTSASYSGDKIHSSLAGDLNDSESIGCSVYTT* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0773 419 FunFam Pantothenate kinase 2 19 178 - -
Vvi1g0773 419 Gene3D - 247 359 - -
Vvi1g0773 419 NCBIfam type II pantothenate kinase 27 369 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vvi1g0773 419 FunFam Pantothenate kinase 1 27 164 - -
Vvi1g0773 419 SUPERFAMILY Actin-like ATPase domain 138 370 IPR043129 -
Vvi1g0773 419 FunFam Pantothenate kinase 2 165 350 - -
Vvi1g0773 419 Pfam Fumble 27 368 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vvi1g0773 419 Gene3D - 20 178 - -
Vvi1g0773 419 PANTHER PANTOTHENATE KINASE 13 371 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vvi1g0773 419 SUPERFAMILY Actin-like ATPase domain 25 165 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0773 Vvi-Chr1 7861008 7870867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0773 K24265 K09680 vvi:100258468 834.328