Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0771 ATGGCCCCAGGAGTGCCCGCAGATGTGTTTACAGCCGGCGGAAAGGTTTCCACCCTCAACGCAGGCTACTCAAAGGGGGCCTACGTCACATTTTTAGCTGGAAACGGGGACTATGTGAAAGGGGTTGTTGGGTTGGCTAAGGGTTTGCGCAAGGTGAAGAGCGCGTACCCTCTTGTGGTTGCAATGTTGCCGGATGTGCCTGAGGAGCACCGTGAGATCTTAAAGTCTCAGGGCTGCATAATTCGTGAAATTGAGCCCATCTACCCTCCTGAGAACCAAATCCAGTTTGCAATGGCATACTACGTCATCAACTATTCCAAACTCCGTATTTGGAATTTCGAGGAATACAGCAAGATGGTGTATTTGGATGCTGATATCCAAGTTTACGACAACATAGACCACCTTATGGACGCCCCGGACGGCTACTTTTACGCGGTAATGGACTGCTTCTGTGAGAAGACATGGAGTCACACTCCCCAGTACTCCGTCGGCTACTGCCAGCAGTGCCCGGACAAGGTGACTTGGCCCGCTGAGATGGGTTCACCTCCACCTTTGTACTTCAACGCTGGGATGTTCGTCTTTGAGCCTAGCCGTTTGACTTATGAAAGCCTTCTCCATACTCTACGGATCACTCCTCCGACCGCCTTTGCCGAGCAAGATTTCTTGAACATGTTCTTCCAACATATGTACAAGCCCATCCCTCTCGTATACAACTTGGTTCTAGCAATGCTGTGGCGACACCCGGAGAACGTTGAGCTCGACCAGGTCAAGGTGGTGCACTACTGTGCTGCTGGATCAAAGCCATGGAGATACACTGGGAAAGAAGCAAACATGGAGAGAGAGGACATCAAGATGTTGGTAGCCAAATGGTGGGACATTTACAATGATAAGTCTCTGGATTTCAAGGCTGAGGACAGTGTTCCAGAGGGAGAAGGATTCTCTAGGCCATCGATCATGGCTTCCATGCCTGAGCCTGCAATCTCCTATATTCCCGCACCCTCTGCTGCTTGA 1011 0.5074 MAPGVPADVFTAGGKVSTLNAGYSKGAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHREILKSQGCIIREIEPIYPPENQIQFAMAYYVINYSKLRIWNFEEYSKMVYLDADIQVYDNIDHLMDAPDGYFYAVMDCFCEKTWSHTPQYSVGYCQQCPDKVTWPAEMGSPPPLYFNAGMFVFEPSRLTYESLLHTLRITPPTAFAEQDFLNMFFQHMYKPIPLVYNLVLAMLWRHPENVELDQVKVVHYCAAGSKPWRYTGKEANMEREDIKMLVAKWWDIYNDKSLDFKAEDSVPEGEGFSRPSIMASMPEPAISYIPAPSAA* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0771 336 FunFam Hexosyltransferase 24 302 - -
Vvi1g0771 336 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 296 IPR029044 -
Vvi1g0771 336 CDD GT8_Glycogenin 27 296 - -
Vvi1g0771 336 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 302 IPR029044 -
Vvi1g0771 336 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 300 - -
Vvi1g0771 336 Pfam Glycosyl transferase family 8 30 272 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0771 Vvi-Chr1 7835696 7837297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0771 25 336 Glycosyltransferase AT1G60470 81.150 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0771 K18819 - vvi:100260266 673.7