Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0770 ATGCTTAGGAGCGGCTGCAGCAGGATTCTAGGGTTAGGGCAACAGGGCAAGCAGGCTCAATCGCAGGCCCTTCTTCGTTTCTATCATGAGAGGGTGGTGGACCATTACAATAACCCCCGCAACGTGGGATCCTTCGACAAGAACGATCCAGACGTCGGCACTGGCCTCGTTGGCGCTCCAGCTTGCGGTGATGTCATGAAGCTTCAAATCAAGGTCGATGATCAAACCGGAAAGATCGTCGATGCTTGCTTCAAGACCTTTGGTTGTGGATCCGCCATCGCCTCTTCCTCTGTTGCCACGGAATGGGTGAAAGGCAAGCAAACGGAGGAAGTTCTATCCATAAAAAATACTGAAGCTGCACTGCAGCATGCTTGCTGA 378 0.5238 MLRSGCSRILGLGQQGKQAQSQALLRFYHERVVDHYNNPRNVGSFDKNDPDVGTGLVGAPACGDVMKLQIKVDDQTGKIVDACFKTFGCGSAIASSSVATEWVKGKQTEEVLSIKNTEAALQHAC* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0770 125 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 14 120 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vvi1g0770 125 Gene3D - 27 124 - -
Vvi1g0770 125 Pfam NifU-like N terminal domain 28 120 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vvi1g0770 125 CDD IscU_like 28 121 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vvi1g0770 125 SUPERFAMILY SufE/NifU 27 120 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0770 K22068 - vvi:100255079 243.432