Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0769 ATGGGGCTGACGTTCACCAAGCTGTTCAGTCGGCTTTTCGCCAAGAAAGAGATGCGCATTCTGATGGTGGGTCTTGATGCTGCCGGTAAGACAACCATCCTGTATAAGCTCAAGCTTGGAGAGATCGTGACGACAATTCCTACCATTGGATTCAATGTGGAGACCGTGGAATACAAGAACATTAGCTTCACCGTGTGGGATGTCGGGGGTCAGGATAAGATTCGTCCATTGTGGAGGCACTACTTCCAAAACACTCAGGGTCTTATATTTGTGGTGGATAGCAATGACAGAGATCGAGTTGTCGAGGCCAGGGATGAGTTGCACAGGATGCTGAATGAGGATGAGCTCCGTGAGGCTGTGCTGCTTGTATTTGCTAACAAACAAGATCTCCCTAATGCTATGAATGCTGCCGAGATAACTGATAAGCTTGGCCTCCACTCTCTCCGGCAGCGTCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTGAAGGGCTTTACGAGGGATTGGATTGGCTCTCCAACAATATTGCTAACAAGGCTTGA 546 0.4927 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELREAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0769 181 SMART rab_sub_5 18 180 - -
Vvi1g0769 181 Gene3D - 4 181 IPR027417 -
Vvi1g0769 181 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Vvi1g0769 181 Pfam ADP-ribosylation factor family 5 177 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 FunFam ADP-ribosylation factor 1 1 181 - -
Vvi1g0769 181 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 176 IPR024156 GO:0005525
Vvi1g0769 181 SMART arf_sub_2 1 181 - -
Vvi1g0769 181 NCBIfam small GTP-binding protein domain 16 157 IPR005225 GO:0005525
Vvi1g0769 181 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Vvi1g0769 181 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Vvi1g0769 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0769 Vvi-Chr1 7791425 7798568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0769 K07937 - zju:107428705 366.311