Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0768 ATGAAAGAGATGAGCGGCAATGAGTTCCGATTCTTTTTGTCCTGCGACATCAATCTTCCAGTTACCTTTCGCATCGAGAGGTTGGAAGGCAATTTGCCTTCTGTCAAGTCCTCTATCTCAGAATTTGATTACACTACAGAGGAGAGAAGAGCTGAGCTATATGTTGAATGTGCACTATTCATTGATGGTGCTCCATTCGGGCTTCCCACTAGAACAAGGTTGGAATCTACAGGACCATCATATTGCTGGAATGAACTCATTACTTTGAGTACAAAATATCGCGACCTAACTGCTCACTCACAACTTGCATTAACAGTTTGGGATGTTTCATGTGGGAAAGATGAGGGATTGATTGGTGGGGCTACCATTCTTCTCTTTAGCAGCAAAAAGCAACTCAAAACAGGGAAACAGAAGCTTAGGCTTTGGCCTGGAAAAGAAGCAGATGGATCATTTCCAACAACTACTCCTGGAAAGGTCCCTAGGCATGAGCGTGGAGAATTGGAGCGTCTAGAAAAGCTTATGAACAAGTATGAAAGGGGACAGATTCAGCGTGTTGATTGGCTGGATCGCCTCACATTCAAAGCCATGGAGAAAATCAAGGAACGAGAAAGCTGTAAAAATGGAAGTTCTCATTTATATCTGGTGGTTGATTTCTGCAGTTTCGAACATCGAGTTGTTTTTCAGGAGTCGGGAGCGAACTTTTTCTTGCCATCCCCTCCTATAGCTTCTACAAATGAACTTGTTATTGTGTGGGATCCAGAAGTGGGGAAAATGAATCCCTCCGAGCACAAGCAACTAAAGCTAGCAAGGAGTTTAGCTCGTGGAATCATTGACAGAGATCTCAAACCAAGCAATAATGAAAGAAAGTCCATACAACGGATATTGAAATACCCCCCAACAAGGATTTTGAGTGGAGATGAGAAGCAGCTTTTGTGGAAATTCCGTTTCTCATTGATGTCTGAGAAGAGGGCTCTCACGAAGTTTCTCCGATGTGTTGAATGGAGTGATCTTCAGGAAGCAAAGCAGGCATTAGAACTGATGGGCAAGTGGGAAATGATAGATGTGTGCGATGCATTGGAGCTTCTGTCTCCTGTTTTTGAAAGTGAAGAGGTTCGTGCATATGCTGTCAGTGTTCTTGAAAGAGCTGATGATGAAGAGCTTCAATGTTACTTACTTCAACTGGTTCAGGCTCTTCGTTTCGAGCGCTCTGATAAATCTCGCCTTTGCCATTTCCTTGTGCAACGATCATTGCGCAATATCGAGTTGGCTAGCTTTCTCCGTTGGTATGTTACCGTGGAACTTAATGATCCTGCATATGCAAAGCGTTTTTACTGTACCTATGAGATCCTCGAAGACAATATGATGAAGTTGGGAGCTGGTGCAAATGGAGATGAAGACGGACTTAAGTTATGGCAGAGTTTGGTGCGTCAGACAGAACTGACAGCTCAGTTGTGTTTAATAATGAGAGATGTAAGAACTGTGCGTGGTGGAACCCAGAAGAAAATTGAAAAGCTTAGACAGCTTCTTTCTGGCCTTCTTAGTGAGCTTACCTATTTTGAAGAGCCAATACGATCACCAGTTGCACCAGGTGTGCTCATCACTGGTATCGTGCCTTCAGAATCATCAATATTCAAGAGTGCTCTGCATCCTTTACGCCTGACTTTCCGAACAGCAAGTGGTGGAAGTTGCAAGATCATATTTAAGAAGGGGGATGATATTCGACAAGACCAATTGGTTGTTCAAATGGTATCTCTCATGGATCGATTGCTTAAATTGGAGAATCTTGATCTACACTTAACTCCGTACAGAGTACTAGCAACTGGACAGGATGAAGGCATGCTGGAATTCATACCATCCAGCTCTTTGGCGCAGATTCTCTCTGAACATCGTAGTATTATAAGCTATCTGCAGAAGTTTCATCCGGATGAGCATGGGCCTTTTGGAATCACAGCCACCTGTCTTGAAACATTTATAAAAAGCTGTGCTGGCTACTCAGTTATTACATATATTCTGGGCATTGGAGACAGGCACCTAGACAACCTTCTCCTTAGGGATGATGGGCGTCTGTTCCATGTTGATTTTGGATTTATTTTAGGCCGAGATCCTAAGCCATTTCCACCACCAATGAAGCTTTGCAAAGAAATGGTTGAGGCTATGGGTGGAGCAGAAAGCCCATACTATACCAGGTTCAAATCCTATTGTTGTGAAGCATACAATATCCTCCGCAAATCTAGTAACCTCATTTTGAATCTGTTCCATCTGATGGCGGGTTCCAATATTCCTGACATAGCTTCTGATCCTGAGAAAGGCATTCTTAAGCTTCAAGAGAAGTTTAAGTTGGACTTGGACGATGAAGCCTGCATTCACTTTTTCCAGGATCTTATCAATGAGAGTGTGAGTGCATTGTTTCCTCAAATGGTTGAAACAATTCATCGGTGGGCTCAATACTGGCGCTGA 2457 0.4318 MKEMSGNEFRFFLSCDINLPVTFRIERLEGNLPSVKSSISEFDYTTEERRAELYVECALFIDGAPFGLPTRTRLESTGPSYCWNELITLSTKYRDLTAHSQLALTVWDVSCGKDEGLIGGATILLFSSKKQLKTGKQKLRLWPGKEADGSFPTTTPGKVPRHERGELERLEKLMNKYERGQIQRVDWLDRLTFKAMEKIKERESCKNGSSHLYLVVDFCSFEHRVVFQESGANFFLPSPPIASTNELVIVWDPEVGKMNPSEHKQLKLARSLARGIIDRDLKPSNNERKSIQRILKYPPTRILSGDEKQLLWKFRFSLMSEKRALTKFLRCVEWSDLQEAKQALELMGKWEMIDVCDALELLSPVFESEEVRAYAVSVLERADDEELQCYLLQLVQALRFERSDKSRLCHFLVQRSLRNIELASFLRWYVTVELNDPAYAKRFYCTYEILEDNMMKLGAGANGDEDGLKLWQSLVRQTELTAQLCLIMRDVRTVRGGTQKKIEKLRQLLSGLLSELTYFEEPIRSPVAPGVLITGIVPSESSIFKSALHPLRLTFRTASGGSCKIIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYRVLATGQDEGMLEFIPSSSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFGFILGRDPKPFPPPMKLCKEMVEAMGGAESPYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFKLDLDDEACIHFFQDLINESVSALFPQMVETIHRWAQYWR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0768 818 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 660 680 IPR018936 GO:0016301
Vvi1g0768 818 Gene3D - 619 818 IPR036940 -
Vvi1g0768 818 FunFam Phosphatidylinositol 3-kinase, root isoform 619 818 - -
Vvi1g0768 818 SMART pi3k_hr3_6 23 126 IPR002420 -
Vvi1g0768 818 Pfam Phosphoinositide 3-kinase family, accessory domain (PIK domain) 280 454 IPR001263 -
Vvi1g0768 818 FunFam Phosphatidylinositol 3-kinase catalytic subunit type 3 467 617 - -
Vvi1g0768 818 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 537 803 IPR000403 -
Vvi1g0768 818 Pfam Phosphoinositide 3-kinase C2 51 193 IPR002420 -
Vvi1g0768 818 CDD C2_PI3K_class_III 4 181 - -
Vvi1g0768 818 CDD PI3Ka_III 278 436 - -
Vvi1g0768 818 SUPERFAMILY ARM repeat 262 451 IPR016024 -
Vvi1g0768 818 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 815 IPR015433 GO:0046854|GO:0048015
Vvi1g0768 818 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 49 160 IPR035892 -
Vvi1g0768 818 SMART pi3k_hr1_6 564 816 IPR000403 -
Vvi1g0768 818 Gene3D - 243 451 IPR042236 -
Vvi1g0768 818 ProSiteProfiles PIK helical domain profile. 278 453 IPR001263 -
Vvi1g0768 818 CDD PI3Kc_III 471 815 - -
Vvi1g0768 818 Gene3D C2 domain 16 167 IPR035892 -
Vvi1g0768 818 PIRSF PI3K_Vps34 3 407 IPR008290 GO:0016303|GO:0046854|GO:0048015
Vvi1g0768 818 PIRSF PI3K_Vps34 403 818 IPR008290 GO:0016303|GO:0046854|GO:0048015
Vvi1g0768 818 Gene3D - 468 617 - -
Vvi1g0768 818 Pfam Phosphatidylinositol 3- and 4-kinase 563 764 IPR000403 -
Vvi1g0768 818 FunFam phosphatidylinositol 3-kinase, root isoform 242 452 - -
Vvi1g0768 818 SMART pi3k_hr2_4 278 463 IPR001263 -
Vvi1g0768 818 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 567 581 IPR018936 GO:0016301
Vvi1g0768 818 FunFam Phosphatidylinositol 3-kinase VPS34 16 168 - -
Vvi1g0768 818 ProSiteProfiles C2 phosphatidylinositol 3-kinase (PI3K)-type domain profile. 17 180 IPR002420 -
Vvi1g0768 818 SUPERFAMILY Protein kinase-like (PK-like) 470 810 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0768 Vvi-Chr1 7763582 7788700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0768 4 818 Acyl Lipid Metabolism Gene Families AT1G60490 85.049 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0768 K00914 - vvi:100263708 1625.14