Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0766 ATGGTGATTCTGGCAACACTACCAGGTTCTTCTAGCCTCTTCTCCTCTCTCCCTCAAGGCCCTCCTCCAAATGACTCCACCACATCAACACCTCCTCAGCCGCCCATCCCAATTCCCAAATACCCACCACCTCTCAAATCCCAAAAATCCTCAAGACCTCCAACTAAACCCCCCACTCCCGCCTTCAAAACCGTTCATCACCGTTCCAAATATTACAAGCCCGTCTCCGATGGCGTTATCGCATCGGATGGTGACCGCTCCGTCGTCATCGGCGAATCCGGCGTGTCATATCTCCTCCCCGGAGCACCATTCGAGTTCCAGTTCAGTTACTCCGAGACGCCCAAAGCTAAGCCCTTGGCAATCCGGGAGCCGGCATTCTTGCCCTTTGCTCCGCCCACAATGCCAAGGCCGTGGACTGGGAAGGCGCCATTGAAGAAATCCAAGAAGAAGATTCCACTCTTTGATTCCTTTAATCCGCCTCCGCCGGGAACCAAGGGGGTGAAGCGTGTGGAAATGCCAGGGCCGTTTCCGCTTGGGAAGTTTCCCGTGGAAGGGAGGACGAGGGAGGAGATACTCGGAGAGCCATTGAGCAAGGCAGAAATACGGATGCTTGTTAAACCCTATTTGTCTCATAATCGCCAGGTTAATCTCGGAAGGGATGGGCTAACCCATAATATGTTGGAGTTGATACATTCACATTGGAAGCGTCAACGAGTTTGTAAAGTTCGTTGCAAAGGTGTTCCGACAATTGACATGGATAATGTTTGCCATCATCTTGAGGAAAAGACTGGGGGTAAAATCATTCATCGAGTTGGTGGTGTAGTTTATCTTTTTCGTGGCAGAAACTACAATTATCGTACTCGTCCGCAGTACCCAGTGATGCTCTGGAAACCAGCTGCTCCTGTTTATCCAAAACTCATACAAGAAGCCCCAGAAGGATTGACAAAATTTGAAGCTGACGAGTTGCGAATGAAGGGGAAAAATCTTATACCAATCTGTCGATTAGAATGCAGTGAAAAATGGAGTATATATTTCCTTAGTGAAAGATGTGAGGGATGCTTTTGA 1065 0.4901 MVILATLPGSSSLFSSLPQGPPPNDSTTSTPPQPPIPIPKYPPPLKSQKSSRPPTKPPTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKFEADELRMKGKNLIPICRLECSEKWSIYFLSERCEGCF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0766 354 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 40 336 IPR044599 GO:0000373
Vvi1g0766 354 SMART CRS1_YhbY_2 196 279 IPR001890 GO:0003723
Vvi1g0766 354 Pfam CRS1 / YhbY (CRM) domain 196 279 IPR001890 GO:0003723
Vvi1g0766 354 MobiDBLite consensus disorder prediction 1 65 - -
Vvi1g0766 354 SUPERFAMILY YhbY-like 195 288 IPR035920 -
Vvi1g0766 354 Gene3D - 195 291 IPR035920 -
Vvi1g0766 354 FunFam CRS2-associated factor 1, chloroplastic 195 290 - -
Vvi1g0766 354 ProSiteProfiles CRM domain profile. 194 290 IPR001890 GO:0003723
Vvi1g0766 354 MobiDBLite consensus disorder prediction 151 171 - -
Vvi1g0766 354 MobiDBLite consensus disorder prediction 24 60 - -
Vvi1g0766 354 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0766 Vvi-Chr1 7746395 7750166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0766 - - vvi:100253421 621.313