Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0762 ATGACGCAAAATAGGGACGAACCTCCTGCGGTTCGAGTATATACCATCTGCGACGAATCAAGATATCTGATCGTGAGGAACGTTCCAGCGTTGGGATGTGGCGACGATTTGTTGAATTTATTCGCCTCATATGGAGACATTGAAGAGTGCAAACCAATGGATGCAGAAGACTGTGAGCCTTTCACTGATGTTTATTGGATCAAATTTCGTCTGGTCAGTAATGCCAGATTTGCAAAAAGGAAATTGGACGAATTTGTTTTTCTCGGGAATCGACTGAAGGTTGAATATGCTCCTCATTTTGAGAGCCTTTCTGACACAAAGGAGAAGTTAGAAGGGAGGAGAAAGGAAGTTTTATCACGACTGAACCCTGGAAGATCCAAAATGCCAACAGTTCATAATCCAGATGCTTTGGGTGAGCCTTTATTGGTTAAAAATCCCTCACAGACCAATTGCATTTCAAAGCAGATGAGCTTTAACCAGAGGATATCTGGAGAATCAGATCATGTTTCTCGCATTAAAGATTCTTCAATCACAACAGTTTCCTCTAACCAGGATTATTTCGGGTCCCCATCAATGAATCAGACAGTTCGGTTGGTAAGGGAGAAGCTTGATAAGATACAATCAAGCAGCCAGCACTTAGAAGCTGGGCCTGCATTCAAGAAAACTCGAGTGGACAACAGAAGAAGAATCTAA 693 0.4228 MTQNRDEPPAVRVYTICDESRYLIVRNVPALGCGDDLLNLFASYGDIEECKPMDAEDCEPFTDVYWIKFRLVSNARFAKRKLDEFVFLGNRLKVEYAPHFESLSDTKEKLEGRRKEVLSRLNPGRSKMPTVHNPDALGEPLLVKNPSQTNCISKQMSFNQRISGESDHVSRIKDSSITTVSSNQDYFGSPSMNQTVRLVREKLDKIQSSSQHLEAGPAFKKTRVDNRRRI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0762 230 MobiDBLite consensus disorder prediction 207 230 - -
Vvi1g0762 230 Gene3D - 17 118 IPR012677 -
Vvi1g0762 230 PANTHER UNCHARACTERIZED 3 230 IPR039599 -
Vvi1g0762 230 CDD RRM_RBM48 11 110 IPR034264 -
Vvi1g0762 230 FunFam RNA-binding protein 48 isoform X4 16 117 - -
Vvi1g0762 230 SUPERFAMILY RNA-binding domain, RBD 9 101 IPR035979 GO:0003676
Vvi1g0762 230 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0762 K24824 - vvi:100249934 466.077