Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0760 ATGATCATTCCAGTTCGTTGTTTTACCTGCGGGAAGGTGATTGGGAATAAATGGGATACCTATCTGGATCTTCTTCAGGCCGACTACACCGAGGGAGATGCTCTTGATGCACTGGGGTTGGTTCGATATTGCTGTAGACGAATGCTCATGACTCATGTTGATCTCATTGAGAAGCTTCTGAACTACAATACACTGGAGAAATCAGAGACCAGTTGA 216 0.4491 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKSETS* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0760 71 ProSitePatterns RNA polymerases N / 8 Kd subunits signature. 2 11 IPR020789 GO:0003677|GO:0003899|GO:0006351|GO:0008270
Vvi1g0760 71 Pfam RNA polymerases N / 8 kDa subunit 2 59 IPR000268 GO:0003677|GO:0003899|GO:0006351
Vvi1g0760 71 Hamap DNA-directed RNA polymerase subunit Rpo10 [rpo10]. 2 56 IPR000268 GO:0003677|GO:0003899|GO:0006351
Vvi1g0760 71 PIRSF RpoN_RPB10 1 71 IPR000268 GO:0003677|GO:0003899|GO:0006351
Vvi1g0760 71 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER 1 70 IPR000268 GO:0003677|GO:0003899|GO:0006351
Vvi1g0760 71 FunFam DNA-directed RNA polymerases I, II, and III subunit 1 69 - -
Vvi1g0760 71 Gene3D - 1 69 - -
Vvi1g0760 71 SUPERFAMILY RNA polymerase subunit RPB10 1 63 IPR023580 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0760 K03007 - tcc:18591123 150.984