Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0755 ATGGTGATTCTGGCAACACTACCAGGTTCTTCTAGCCTCTTCTCCTCTCTCCCTCAAGGCCCTCCTCCAAATGCCTCCACCACATCAACACCTCCTCAGCCGCCCATCCCAATTCCCAAATACCCACCACCTCTCAAATCCCAAAAGTCCCCAAGACCTCCAACTAAACCCTCCACTCCCGCCTTCAAAACCGTTCATCACCGTTCCAAATATTACAAGCCCGTCTCCGATGGCGTTATCGCATCGGATGGTGACCGCTCCGTCGTCATCGGCGAATCCGGCGTGTCATATCTCCTCGCTGGAGCACCATTCGAGTTCCAGTTCAGTTACTCCGAGACCCCCAAAGCTAAGCCCTTGGCAATCCGGGAGCCGGCATTCTTGCCCTTTGCTCCGCCCACAATGCCAAGGCCGTGGACTGGGAAGGCGCCATTGAAGAAATCCAAGAAGAAGATTCCACTCTTTGATTCCTTTAATCCGCCTCCGCCGGGAACCAAGGGGGTGAAGCGTGTGGAAATGCCAGGGCCGTTTCCGCTTGGGAAGTTTCCCGTGGAAGGGAGGACGAGGGAGGAGATACTCGGAGAGCCATTGAGCAAGGCAGAAATACGGATGCTTGTTAAACCCTATTTGTCTCATAATCGCCAGGTTAATCTCGGAAGGGATGGGCTAACCCATAATATGTTGGAGTTGATACATTCACATTGGAAGCGTCAACGAGTTTGTAAAGTTTGGTGCAAAGGTGTTCCGACAATTGACATGGATAATGTTTGCCATCATCTTGAGGAAAAGACTGGGGGTAAAATCATTCATCGAGTTGGTGGTGTAGTTTATCTTTTTCGTGGCAGAAACTACAATTATCTTGCGAATGAAGGGGAAAATCTTATACCAATCTGTCGATTAGTGAAAAATGGAGTATATATTTCCTTAGTGAAAGATGTGAGGGATGCTTTTGAAGGAAGTCCATTGGTGAAGATTGACTGTAAAGGGATGCATGCAAGTGATTACAAAAAGATAGGTGCTAAGCTTAAGGAATCGGTTCCTTGTGTGCTACTTTCTTTTGATGATGAACAGATATTAACATGGAGGGGACATGGTTGGAAATCAATGTACCAAGGAGCTCCTTCTTTCCTCATTCCTGTTGTTGCTGATGTTGCAAGTGGCTTGGAAGGTTCAGGCGTTCCCAAGAGCAACCATCATAGACTGGATACTAAAGCAGTGAGCGCAAGCCCTAAAATGATGTCTCTGTGGAAGAGTGCAATTGAGTCGAGCAAAGCATTGTTGCTGGATGAGATTGGTCTTGGTCCGGATGCTCTTTTGAAGGTAGTAGAGGAATTCGAAGGCATTTCACAGGCCACCGAGCACTCCTATCCAGCTTTAGTGATGTCAAGTGAAGATGGAACTGGTGGTACAAAGGCAGAGCATGAAGGTTATAATAGTGAGGATTATAGTGAAGATGAGATGTACAATGATGATGATGATGAATACTTGGTGAATGAGTCATTGGAAGAGATGGAATCACCAGTTCCACTGGGTTCCTTACCTGTTGATCTGTTAGCTAAGCAGCTTGATAGAATTTCTTTAGGGGTAAATTCTGTATCTTTATCTCTTTTATTTTATAATTCTAAAGAGATATTAGTAAAAATTATTTGTGTCAAAGTTAAATGGGATTAA 1668 0.455 MVILATLPGSSSLFSSLPQGPPPNASTTSTPPQPPIPIPKYPPPLKSQKSPRPPTKPSTPAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLAGAPFEFQFSYSETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRVEMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYLANEGENLIPICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKESVPCVLLSFDDEQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMMSLWKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAEHEGYNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLDRISLGVNSVSLSLLFYNSKEILVKIICVKVKWD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0755 555 Pfam CRS1 / YhbY (CRM) domain 196 279 IPR001890 GO:0003723
Vvi1g0755 555 Pfam CRS1 / YhbY (CRM) domain 284 361 IPR001890 GO:0003723
Vvi1g0755 555 MobiDBLite consensus disorder prediction 462 485 - -
Vvi1g0755 555 FunFam CRS2-associated factor 1, chloroplastic 195 289 - -
Vvi1g0755 555 SMART CRS1_YhbY_2 196 279 IPR001890 GO:0003723
Vvi1g0755 555 SMART CRS1_YhbY_2 285 361 IPR001890 GO:0003723
Vvi1g0755 555 MobiDBLite consensus disorder prediction 151 171 - -
Vvi1g0755 555 MobiDBLite consensus disorder prediction 8 23 - -
Vvi1g0755 555 MobiDBLite consensus disorder prediction 24 58 - -
Vvi1g0755 555 Gene3D - 195 285 IPR035920 -
Vvi1g0755 555 SUPERFAMILY YhbY-like 284 369 IPR035920 -
Vvi1g0755 555 ProSiteProfiles CRM domain profile. 194 290 IPR001890 GO:0003723
Vvi1g0755 555 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 40 285 IPR044599 GO:0000373
Vvi1g0755 555 Gene3D - 286 372 IPR035920 -
Vvi1g0755 555 MobiDBLite consensus disorder prediction 1 62 - -
Vvi1g0755 555 SUPERFAMILY YhbY-like 195 285 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0755 Vvi-Chr1 7666013 7675480 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0755 - - vri:117924281 937.562