Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0752 ATGGATGAGTTGGAGCAATGGAGGATTCAGCTACAACAATGGTCCCGTCAAGGGGCAGAATGGTTTCATCAGATGCCCGAAACTCAATTATATGCGGCTATTGCTGTTGTGTTCGTCACAACCTTTTTTCTGTTATCAATTCGCCTGTTCAAGCGCACAAAATCCAATACCGTTGTACTTACTGGGCTTAGTGGAAGTGGCAAAACTACTCTTTTCTACCAACTTCAAGATGGTTCGTCCCATCTGGGTACTGTGACATCAATGGATCCAAATGAGGGGACTTTTGTGCTACATTCGGAAATAGCAAAGAAGGGTAAAATAAAGCCTGTTCATGTTGTTGATGTTCCTGGGCATTCTCGTCTTCGACCCAAACTGGATGAGTTCTTGCCTCAGGCAGCTGGGATAGTTTTTGTAGTGGATGCTTTGGAATTCTTACCTAACTGCCGAGCAGCTTCAGAGTACCTGTATGATATTTTGACTAAGTCGAGTGTTGTCAAGAAGAAAATTCCAGTTCTCATCCTCTGCAACAAAACTGACAAAGTAACTGCTCATACCAAGGAATTCATCAGGAAACAACTGGAAAAGGAAATTGAGAAGTTCCGCGCATCAAGAAGTGCAATATCAGCAGCTGATGTTGTGAATGAATTTACTCTTGGGGTACCTGGAGAAGCCTTTGGATTTTCGCAATGCCATAACAAAGTCACAGTTGCAGATGCATCTGGTTTGACTGGGGAGATATCTCAGCTGGAAGAGTTTATTAGGGAATATGTAAAGCCGTAG 780 0.4308 MDELEQWRIQLQQWSRQGAEWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVLTGLSGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDKVTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTVADASGLTGEISQLEEFIREYVKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0752 259 Gene3D - 50 257 IPR027417 -
Vvi1g0752 259 PANTHER TRANSFERRIN 27 256 - -
Vvi1g0752 259 Coils Coil 190 210 - -
Vvi1g0752 259 CDD SR_beta 56 256 IPR019009 -
Vvi1g0752 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 194 IPR027417 -
Vvi1g0752 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Vvi1g0752 259 ProSiteProfiles small GTPase Arf family profile. 49 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0752 Vvi-Chr1 7651553 7654511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0752 1 259 Miscellaneous Gene Families AT5G05670 74.231 2.26e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0752 K12272 - vvi:100265371 514.227