Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0751 ATGGCGCGCAAGAAGATCAGAGAGTACGATTCCAAGAGGCTGTTGAAGGAGCATTTTAAGAGGCTCTCTGGTACCGACCTTCCAATTAAATCAGCTCAAATCACAGAGTCAACTGACTTCAATGAGCTAGCAGAGAAGGAACCTTGGCTCTTATCAGGGAAACTGGTCGTGAAACCTGACATGTTATTTGGCAAGCGTGGGAAGAGTGGTTTAGTTGCCCTGAATTTAGATTTGGCTCAAGTTGGTACTTTCGTGAAAGAACGTCTTGGCAAAGAGGTAGAGATGGGGGGATGCAGAGGGCCTATCACAACATTCATTGTTGAACCCTTCATCCCACACAATGAAGAGTTTTACCTAAACATGGTTTCAGAGCGACTTGGGAGTAGCATAAGCTTTTCCGAATGTGGAGGTATTGAAATTGAAGAGAACTGGGATAAGGTTAAAACTATATTTATCCCAACCGGGGCCACTTTTACCTCAGAAATTTGTTCTCCACTAGTTGCCACCCTTCCCTTGGAGATCAAGGGGAAAATTGAGGAGTTTATCAAAGTGGTTTTTGCTTTATTTTTAGATCTGGACTTCACTTTCCTAGAGATGAATCCTTTTACATTGGTTGATGGAAAGCCTTATCCTTTGGATATGAGAGGCGAGCTGGACGATACTGCTGCTTTCAAGAACTTCAAGAAGTGGGGCAATATTGAATTTCCAATGCCATTTGGAAGAGTTATGAGTCCTACAGAAACCTTTATTCATGGGCTAGATGAAAAGACAAGTGCCTCTTTGAAGTTCACAGTTCTGAACCCCAAGGGACGGATTTGGACTATGGTAGCAGGAGGAGGTGCAAGTGTCATCTATGCAGATACGGTTGGTGATCTCGGTTATGCTTCTGAGCTTGGGAACTATGCAGAGTATAGTGGAGCACCAAATGAAGAGGAAGTATTGCAGTATGCTAGAGTTGTAATTGATTGTGCAACTGCAAACCCTGATGGCCTTAAGAGAGCTCTTGTAATTGGAGGAGGAATAGCTAACTTTACTGATGTTGCTGCTACTTTTAATGGCATAATTCGCGCTTTGAAAGAGAAGGAATCAAAGCTTAAAGCTTCAAGAATGCACATATACGTTAGGAGAGGAGGTCCAAATTACCAGAGGGGTCTTGCAAAAATGCGGACTCTTGGAGAGGAAATTGGAATCCCTCTTGAGGTTTATGGACCTGAGGCAACCATGACTGGCATATGCAAACAGGCAATTGAGTGCATCGGTGCTGCTGCATAA 1272 0.4347 MARKKIREYDSKRLLKEHFKRLSGTDLPIKSAQITESTDFNELAEKEPWLLSGKLVVKPDMLFGKRGKSGLVALNLDLAQVGTFVKERLGKEVEMGGCRGPITTFIVEPFIPHNEEFYLNMVSERLGSSISFSECGGIEIEENWDKVKTIFIPTGATFTSEICSPLVATLPLEIKGKIEEFIKVVFALFLDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGNIEFPMPFGRVMSPTETFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGLKRALVIGGGIANFTDVAATFNGIIRALKEKESKLKASRMHIYVRRGGPNYQRGLAKMRTLGEEIGIPLEVYGPEATMTGICKQAIECIGAAA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0751 423 Gene3D - 240 421 IPR016102 -
Vvi1g0751 423 FunFam ATP-citrate synthase alpha chain protein 1 233 - -
Vvi1g0751 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Vvi1g0751 423 Gene3D - 1 233 - -
Vvi1g0751 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Vvi1g0751 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Vvi1g0751 423 PANTHER SUCCINYL-COA SYNTHETASE BETA CHAIN 5 389 IPR005809 GO:0006099
Vvi1g0751 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Vvi1g0751 423 FunFam ATP-citrate synthase alpha chain protein 240 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0751 Vvi-Chr1 7629740 7634643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0751 1 423 Acyl Lipid Metabolism Gene Families AT1G10670 87.470 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0751 K01648 - vvi:100255189 838.18