Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0747 ATGGAATGGAAAAAGCTTGGGTTTTCGGAGCAGATTCTATCACCGAAAAGGAAAGTAGTTTCTGGTTTTGCTTTGGGCTTAGGAGCTTCACTCATTGTTCTAACTATTGTATCGTTCAACACCTCTTTCAATGTTCCAATGTTTCGAGGGTTCAGCAATTTTGGTGCTAATTTCCACGACTCTGCGGATTTTAAGCAGGGAACTGAGGATGGAAGGGTTGTGGACAGCACCCCTCAAGCAAGTCTATCAGGGATGGATAAAGATGGAGATCCTCTGGGCATTGTTTTGGAGAAGACCCACTTGGGGAACACCTCTGAGATGGTGAAAAATGGGAGCTTTACTGTTGATGGAGGATGGATTCCAGAAACAACGCATGCAGATGCCTCAGGCACTGCCACAAAGGCAAGTCTTTCGAATTCTAATGTGGAAGGTATGACTTCAGATATGGCAATTTTGGGGAATTCCTCTGAGATGGTGAATAATGGAAGTTCCCCTGGTGAAGAAGGAACTGTCATTGGGAAAACCGGTCTTGGAGGGAATACCAGTGATGGGAAAATTTTTGTCGCTGAAAATAACAATGTAGGGAATTTGTCATATAGTGGGGAATATACCAAACCTCCCACTGAAGAAGAAAGCGGGACGGCGGGGAATGATGCAGGAAAAGCGACCACGAATAACAAAATTACAGCCACTCACTACCATTCACAACTTAAGAAAATGCCAAACAGTTTTTATGGGGGTTGTGATATATTTGATGGTAGATGGGTAAGGGATGATTCAAAGCCATACTATCCTGCTGGGTCTTGTCCTTACATCGATAGGGATTTCGATTGTCACCTTAATGGAAGGCCGGATGATGATTATTTGAAATGGAGATGGCAGCCGAATGGGTGTGACATCCCGAGTCTAAATGCAACTGATTTCCTGGAGAGATTAAGAGGGAAGAAGCTCATTTTTGTGGGAGATTCTCTAAACAGGAACATGTGGGAGTCTATGGTATGCATTCTCCGTCATAGTGTCGAAGACAAAAAAAGAGTTTATGAGATTTCTGGAAGAAAGGAATTCAAAAAGAAGGGATTTTATGCTTTCAGATTTGAGGACTATAATTGTTCTGTGGATTTTGTCAATGCTCCATTTCTTGTTCAAGAATCATCTTTTAACGGTAGAAACAGAACGTTTGAGACACTAAGACTGGATGAGATGGACAAATCAACTACGACATTTCATGATGCTGATATCATAGTCTTCAATACAGGCCATTGGTGGACTCATGAGAAAACATCTAGAGGAGAATACTATTACCAAGAGGGCAACTATGTGCACCCAAGACTGAAGGTCCTTAAAGCATACACAAAGGCCCTTACAACTTGGGCAAGGTGGGTTGACAAGAACATCAATAGCAACATGACTCAGGTTTTCTTCAGAGGATATTCAATCACCCATTTCAAAGGAGGCCAATGGAACTCAGGAGGACAGTGTCACAAAGAAGTGGAGCCAATCTTTAATGAGGCTTTCATACGAAAGTACCCTTCAAAAATGAGAGCTCTAGAGCCTGTGCTCCAGATGATGAGAACACCGGTAACATACCTAAATGTAAGTAGGCTTACAGATTATCGAAAAGATGGGCACCCTTCTATTTACAGAAAAGAATACAAGACAGTAGAAGAAGAGATTGCAGCTGTGCACTCTCAGGATTGCAGCCATTGGTGCTTGCCTGGAGTACCAGATACTTGGAACGAGTTACTATATGCATCTCTCCTACAGATCGGAAGAGGATCCTGGGGAAGCTGA 1791 0.4271 MEWKKLGFSEQILSPKRKVVSGFALGLGASLIVLTIVSFNTSFNVPMFRGFSNFGANFHDSADFKQGTEDGRVVDSTPQASLSGMDKDGDPLGIVLEKTHLGNTSEMVKNGSFTVDGGWIPETTHADASGTATKASLSNSNVEGMTSDMAILGNSSEMVNNGSSPGEEGTVIGKTGLGGNTSDGKIFVAENNNVGNLSYSGEYTKPPTEEESGTAGNDAGKATTNNKITATHYHSQLKKMPNSFYGGCDIFDGRWVRDDSKPYYPAGSCPYIDRDFDCHLNGRPDDDYLKWRWQPNGCDIPSLNATDFLERLRGKKLIFVGDSLNRNMWESMVCILRHSVEDKKRVYEISGRKEFKKKGFYAFRFEDYNCSVDFVNAPFLVQESSFNGRNRTFETLRLDEMDKSTTTFHDADIIVFNTGHWWTHEKTSRGEYYYQEGNYVHPRLKVLKAYTKALTTWARWVDKNINSNMTQVFFRGYSITHFKGGQWNSGGQCHKEVEPIFNEAFIRKYPSKMRALEPVLQMMRTPVTYLNVSRLTDYRKDGHPSIYRKEYKTVEEEIAAVHSQDCSHWCLPGVPDTWNELLYASLLQIGRGSWGS* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0747 596 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 209 582 IPR029962 GO:0016413
Vvi1g0747 596 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 300 584 IPR026057 GO:0016740
Vvi1g0747 596 Pfam PMR5 N terminal Domain 247 299 IPR025846 -
Vvi1g0747 596 MobiDBLite consensus disorder prediction 200 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0747 Vvi-Chr1 7573192 7577491 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0747 - - vvi:100249925 1231.08