Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0745 ATGGCTTCACTTCAGTTCCTCCTTCGCCCATCCTCCAATCCCAATCTTCTCGCTTTACCCTCCAGATGTCGATCGGTTCGATGTGCCGACGAACGCCAGGCGCTGTTTAACCGCATTGCTCCTGTTTACGACAATCTGAATGATTTCTTGAGTTTGGGGCAGCACCGGATATGGAAAAGAATGGCGGTATCATGGAGCGGGGCCAAGAGGGGAGACAATGTGTTGGATTTGTGTTGTGGAAGTGGGGATTTGGCATTTCTACTATCAGAAAGAGTTGGGTCTGATGGCAAGTTCGCTTTGTATAAGAAAAACCACCTAAGAGTGGGTTTAGGGGTGGTAGGACGGTGGAGGAGGGAGCGGGGGTTGAATTAA 372 0.5 MASLQFLLRPSSNPNLLALPSRCRSVRCADERQALFNRIAPVYDNLNDFLSLGQHRIWKRMAVSWSGAKRGDNVLDLCCGSGDLAFLLSERVGSDGKFALYKKNHLRVGLGVVGRWRRERGLN* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0745 123 Gene3D Vaccinia Virus protein VP39 38 105 IPR029063 -
Vvi1g0745 123 Pfam ubiE/COQ5 methyltransferase family 33 101 - -
Vvi1g0745 123 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 36 97 IPR029063 -
Vvi1g0745 123 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 43 58 IPR023576 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0745 Vvi-Chr1 7543359 7545963 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0745 K23095 - vvi:100246556 185.652