Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0744 ATGAGGTACTCAGATACAGATTTCCTCAACAAGGAATCAGATAATGGAAGTTCAACAGGGACCATAACAATAATAGTAGCATCTGCTGTAAGTGCTGTGATTGTTCTTCTAGTAGTGGGAGCAATTGGAGTTTATATCTGGAAGCAAAGAAAAATCCAAAAGAAAAGGAGAGGTTCCAACGATGCTATAAAATTAGTTAAGACCCTCCATGACAGTAGCTTGAACTTCAAATATGCTACACTTGAGAAGGCCACAGGATCTTTTGACAATGCCAGTAAACTTGGACAGGGAGGATTTGGAACTGTTTATAAGGGAGTTCTGGCTGATGGAAGAGAGATTGCCGTGAAGAGGCTTTTCTTTAACAACAGACACAGAGCAGCAGATTTCTATAATGAAGTTAACATGTAA 408 0.3922 MRYSDTDFLNKESDNGSSTGTITIIVASAVSAVIVLLVVGAIGVYIWKQRKIQKKRRGSNDAIKLVKTLHDSSLNFKYATLEKATGSFDNASKLGQGGFGTVYKGVLADGREIAVKRLFFNNRHRAADFYNEVNM* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0744 135 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 134 - -
Vvi1g0744 135 ProSiteProfiles Protein kinase domain profile. 88 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g0744 135 SUPERFAMILY Protein kinase-like (PK-like) 68 135 IPR011009 -
Vvi1g0744 135 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Vvi1g0744 135 CDD TM_EGFR-like 18 55 - -
Vvi1g0744 135 Gene3D Phosphorylase Kinase; domain 1 48 135 - -
Vvi1g0744 135 FunFam Uncharacterized protein 56 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0744 Vvi-Chr1 7536963 7537993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0744 1 135 Receptor kinase-like Gene Family AT1G70520 71.111 1.13e-50 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0744 - - vvi:100241439 216.853