Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0740 ATGGCTTCACTTCACTTCCTTCTTCGCCCATCCTCCAATCCCAATCTTCTCGCTTTACCCTCCAGATCTCGACCGGTTCAATGTGCTAACGAGCGCCAGGCGCTGTTTAGCCGCATTGCTCCTGTTTACGATAATCTGAATGATTTCTTGAGTTTGGGGCAGCACCGGATATGGAAAAGAATGGCGGTATCATGGAGCGGGGCCAAGAGGGGAGACGATGTGTTGGATTTGTGTTGTGGAAGTGGGGATTTGGCATTTCTACTATCAGAAAGAGTTGGGTCTGATGGCAAGGTGATAGGTTTTGATTTCTCAAGGGAGCAATTATCGGTTGCTTCATCTCGACAACACTTGCTCTCAAAAGCCTGCTACAAGAACATTGAGTGGATTGAGGGCGATGCAACTAAGTTGCCTTTTTCTGATTGTTCTTTTGATGCCATTACCATGGGTTATGGGCTACGAAATGTGTTAGATAGAGGCAAGGCCATGCAAGAGATGTTTCGAGTCTTGAAACCAGGGTCAAGGGTATCCATCCTCGATTTCAATAAAAGCACTAAACCATTTATTACATCAATTCAGGAATGGATGATTGATAATGTAGTTGTTCCTGTTGCAACTGGTTATGGCCTTGCTGATGAGTATGCATATTTGAAAAGCTCAGTTCAGGAATTCTTAACAGGGAAGGAGTTGGAGAAGCTTGCTTTAGAAATGGGATTTTCCAATGCCAAACATTATGAGATTGGTGGAGGCATCATGGGGAACTTAGTAGCCAAACGGTAG 777 0.4453 MASLHFLLRPSSNPNLLALPSRSRPVQCANERQALFSRIAPVYDNLNDFLSLGQHRIWKRMAVSWSGAKRGDDVLDLCCGSGDLAFLLSERVGSDGKVIGFDFSREQLSVASSRQHLLSKACYKNIEWIEGDATKLPFSDCSFDAITMGYGLRNVLDRGKAMQEMFRVLKPGSRVSILDFNKSTKPFITSIQEWMIDNVVVPVATGYGLADEYAYLKSSVQEFLTGKELEKLALEMGFSNAKHYEIGGGIMGNLVAKR* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0740 258 Gene3D Vaccinia Virus protein VP39 38 258 IPR029063 -
Vvi1g0740 258 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 31 258 IPR032904 GO:0042372|GO:0052624
Vvi1g0740 258 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 34 257 IPR004033 GO:0008168
Vvi1g0740 258 PANTHER METHYLTRANSFERASE 40 241 - -
Vvi1g0740 258 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 23 258 IPR004033 GO:0008168
Vvi1g0740 258 CDD AdoMet_MTases 73 177 - -
Vvi1g0740 258 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 250 IPR029063 -
Vvi1g0740 258 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 21 258 IPR004033 GO:0008168
Vvi1g0740 258 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 43 58 IPR023576 GO:0008168
Vvi1g0740 258 Pfam ubiE/COQ5 methyltransferase family 33 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0740 Vvi-Chr1 7494201 7502178 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0740 69 215 Acyl Lipid Metabolism Gene Families AT3G18000 31.973 7.32e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0740 K23095 - vvi:100246556 518.85