Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0732 ATGGTGAAGGTTTTGTTGGTATTGATAGCTTACCTAAGCTTTCTGGTGGTTTCAGGTCACGCCATCGACTCTCCGCAGTACACGGTTGTACACTCACAATCTGATTTCCAGATTAGACTCTACAGACAGTCCTCTTGGATGTCTGCTACCGTCCATGGCACCTCTTTCAACAAGTCCACGAAAGACGCCTTTCACAGGTTGTATAAATACATTCATGGTGCTAACCTTAACTCTTCCCAGTTTGCCATTACTGCTCCTGTTTTAACAAGCGTCACCCCATCAGCACTTGGGTCTGAATATACTGTGAGGTTCTTTTTTTCTCCAAAGTATGAGGAATCTCCTCCACAGCCCTATCCTGAGCTGAACTTGCAGTTTGACAAATGGAGAAGCCACTGTGTAGCAGTCAGAGTGTTTCCAGGGTTCGCCAAGGACGACACCATCAGCAAAGAAATAAAAGCTCTTGAGACCAGTTTGGATGATTACTTGTTTGGAAAATCAGCAGTTCTAGAAGAGAAGAATTCCTACACAATAGCCCAGTACAATGCTTCATATCATCCTACTGGCCGTGTAAATGAAGTTTGGTTGAATATTTCTGGTTTAACAGCAGAAGGATGTCCATCCTATGGAGGGAAATATTGA 639 0.4366 MVKVLLVLIAYLSFLVVSGHAIDSPQYTVVHSQSDFQIRLYRQSSWMSATVHGTSFNKSTKDAFHRLYKYIHGANLNSSQFAITAPVLTSVTPSALGSEYTVRFFFSPKYEESPPQPYPELNLQFDKWRSHCVAVRVFPGFAKDDTISKEIKALETSLDDYLFGKSAVLEEKNSYTIAQYNASYHPTGRVNEVWLNISGLTAEGCPSYGGKY* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0732 212 Gene3D Regulatory factor, effector binding domain 21 201 IPR011256 -
Vvi1g0732 212 PANTHER HEME-BINDING PROTEIN-RELATED 21 195 IPR006917 -
Vvi1g0732 212 FunFam Heme-binding protein 2 22 203 - -
Vvi1g0732 212 Pfam SOUL heme-binding protein 23 195 IPR006917 -
Vvi1g0732 212 SUPERFAMILY Probable bacterial effector-binding domain 14 196 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0732 Vvi-Chr1 7385836 7387090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0732 - - vvi:100250014 432.95