Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0730 ATGGTTGTTTTGTGTTGGATGGATTTGGTGGGAGATATGGCTCCATGGACAAAGACTAGGAATAAATGGTATTATTTTGATCACAGAAGAAGACAACACCAATGTACACAGCCACAAACAGGTTTAGCAGAAGAAACAACACAAACAATTTCCTCAAACATGGCTTCTAGCTACTGCAAGATCTCCCCAATCATTCCCATTTTTGTATCTTTTCTTCTTGTTGCTTCCTCCGTCTGTTCAGTCCATTCCTCCGAAACCGACCGCCCAGCCAATCAAACATTCCGGCCTGGGGAGGAGTTAGAGAAGTTGAAGATAATAAGAGACCATCTCCTGAAGATCAATAAGCCTGCCGTCAAGACAATTCAGAGTCCTGATGGTGATCTGATTGATTGTGTTCTATCTCATCTGCAACCAGCTTTTGATCATCCACAATTAAAAGGACAGAAACCATTGGATCCACCGGAGAGACCGAAAGGCCATAACCCAACAGGTGCAGTATCAGAAGATTTTCAGCTATGGAGTTTTTCTGGTGAGTCGTGTCCAGAAGGGACAATTCCAATCCGAAGAACAACTGAAGAAGATGTTTTAAGAGCGAGCTCTATTGGAAGATTTGGAAGAAAAGTAAGGCGACATGTTAGAAGAGACTCCTCCAGCAATGGCCATGAGCATGCAGTTGGGTATGTGACTGGAGATCAGTACTATGGAGCAAAGGCCAGCATAAATGTGTGGGCACCCCGGGTGGCTAATCAATATGAATTCAGCTTATCACAAATGTGGGTCATCTCCGGTTCATTCGGTGATGATCTCAACACCATTGAAGCTGGCTGGCAGGTTAGTCCAGAACTCTATGGGGACAACTATCCTAGGTTCTTTACTTACTGGACTACTGATGCATATCAAGCCACTGGATGCTACAATCTGCTATGCTCAGGCTTTGTTCAGACCAACAATAGGATTGCAATTGGGGCTGCCATCTCTCCAACCTCGTCATACAAAGGTGGACAATTCGATATCAGCCTACTGGTCTGGAAGGTACTTCAATTTTTTTTGCCCTCTTCGTTTTTTATCAGCTTACTGTGTTCGATAGAGCAATTTTATCATGCACTTCCTTTCTTTCTTTCTTTTGACCATTGTATATATTATTACGTAGATTAG 1155 0.4312 MVVLCWMDLVGDMAPWTKTRNKWYYFDHRRRQHQCTQPQTGLAEETTQTISSNMASSYCKISPIIPIFVSFLLVASSVCSVHSSETDRPANQTFRPGEELEKLKIIRDHLLKINKPAVKTIQSPDGDLIDCVLSHLQPAFDHPQLKGQKPLDPPERPKGHNPTGAVSEDFQLWSFSGESCPEGTIPIRRTTEEDVLRASSIGRFGRKVRRHVRRDSSSNGHEHAVGYVTGDQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPTSSYKGGQFDISLLVWKVLQFFLPSSFFISLLCSIEQFYHALPFFLSFDHCIYYYVD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0730 384 MobiDBLite consensus disorder prediction 142 164 - -
Vvi1g0730 384 FunFam Putative carboxyl-terminal proteinase 242 348 - -
Vvi1g0730 384 Pfam Neprosin activation peptide 120 227 IPR025521 -
Vvi1g0730 384 Gene3D - 243 345 - -
Vvi1g0730 384 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 106 338 - -
Vvi1g0730 384 Pfam Neprosin 251 344 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0730 Vvi-Chr1 7333246 7336020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0730 - - vvi:100246465 707.212