Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0729 ATGAAGTTTATGAAACTTGGGTCACGGCCCGATACTTTCTATACCACCGAGGCTGTGAGGTCTGTCTCCTCAGAAATCTCTAGTGATCTCATAGTTCAAGTGAAAGGAAGCAGATATATGCTTCACAAGTTTCCTTTGCTCTCCAAGTGCTTGCGTCTACAGAGGCTATGCTCTGAATTCCATGAATCCGCACAACCCCAAATAGTCCAACTGCCCGATTTCCCAGGTGGGGTAGATGCATTTGAACTGTGCGCCAAGTTTTGCTATGGAATCACAATCACTCTCAGCGCCTTCAACATTGTGTCCGCTCGGTGTGCTGCAGAATACCTCCAGATGACGGAGGATGTTGAGAAGGGAAACCTCATATACAAGCTCGAGGTTTTCTTCAATTCCTGCATCCTTCATGGTTGGAAGGACTCAATTGTGACTCTGCAGAGCACCAAATCCTACCCTTTGTGGTCAGAAGACCTTGGAATCACAAGCCGTTGCATCGAAGCAATCGCTTCAAGGGTCCTAAGCCATCCCTCAAAGGTGAATTTGTCACATAGTTACTCCCGAAGGGGCAGGGATGATTTGTCGTCCTGTAATGGAACAGAAAGCCTGAGACATAGACCTGTTAGTAAGGGGTGGTGGGCTGAAGACATAGCTGAATTGGGCATAGACCTTTATTGGAGAACAATAATAGCAATTAAATCCGGTGGGAAGGTACCATCTAATCTCATTGGTGATGCATTAAAAATTTATGCGTCTAGATGGCTACCCAACATTTCTAAAGATGGAACCATCATGAAACGAGCTGCGTCTGACCCAGATTCTGATTCAATAGGCGAGATAACTTCAAAGCATCGGTTTCTCTTGGAATCAATAGTAAGCCTACTCCCGGCGGAAAAGGGTGCTGTTTCTTGTAGTTTCCTGCTTAAACTCTTAAAGGCAGCCAATATACTCAAAGCTTCCTCTTCTTCCAAGATGGAATTGGCCAGAAGAGTAGGAATTCAATTGGAGGAAGCAACAGTCAATGATCTGTTAATACCTTCTTTATCATATACTAATGATACATTATATGACCTAGATATAGTCATGATCATACTGGAGCAGTTCATGTTGCAGGGGCAGAGTCCCCCTATTACCCCACCGAGAGTCAAGGGGAGTTTTGAGAAGCGGAGGTCTAGGTCTGCAGAGAATGTTGATTTTGGGTTTCAGGAGAGCAGGAGGTCTTCCTCCGCCTCCCATAGCTCAAAATTGAGGGTGGCAAAGCTTGTGGATGGGTATCTTCAAGAGATAGCCCGTGATGTTAATTTGCCTCTTTCAAAGATGATAGCACTTGCTGAGGCTGTACCAGATTTTGCAAGGCTAGACCATGATGATCTATACAGAGCTATTGACATTTATCTCAAGGCACACCCAGACCTCAGCAAGAGTGAAAGGAAACGATTGTGCCGAATCCTAGACTGCAAAAAACTATCAGTGGAGGCCTGCATGCATGCAGCACAGAACGAGTTACTGCCACTGAGGGTGGTGGTGCAAGTCCTTTTCTTTGAGCAAGCTCGAGCGGCTATGGCCGGTGGCCAAGTTACAGAGCTGCCTAACAATATCAAGGCACTTCTAGCCACACACAATGTTGATCCATCAAGGCCTCCAGCGCCATTAAGCACCACAACTACAGTTGCGGCAGAGGACCAGTGGAGCATCTCTGGCCTCAAATCCCCAAAGTCTAGCCTTTCAACTTTAAGGATGAAGCTGGCGGAAGATGATGACCTGGAGGAAAATGATATCCACCCGGATGGAATTGGGAGGTCCTCTAAGCTTAAAGCTCTCTGCTCAATTCCTACTCGGCCTAAAAGAATGCTCAGTAAGTTGTGGTCCATCAATAGAAGTGCAAGCGAAAAGAATTGA 1893 0.4606 MKFMKLGSRPDTFYTTEAVRSVSSEISSDLIVQVKGSRYMLHKFPLLSKCLRLQRLCSEFHESAQPQIVQLPDFPGGVDAFELCAKFCYGITITLSAFNIVSARCAAEYLQMTEDVEKGNLIYKLEVFFNSCILHGWKDSIVTLQSTKSYPLWSEDLGITSRCIEAIASRVLSHPSKVNLSHSYSRRGRDDLSSCNGTESLRHRPVSKGWWAEDIAELGIDLYWRTIIAIKSGGKVPSNLIGDALKIYASRWLPNISKDGTIMKRAASDPDSDSIGEITSKHRFLLESIVSLLPAEKGAVSCSFLLKLLKAANILKASSSSKMELARRVGIQLEEATVNDLLIPSLSYTNDTLYDLDIVMIILEQFMLQGQSPPITPPRVKGSFEKRRSRSAENVDFGFQESRRSSSASHSSKLRVAKLVDGYLQEIARDVNLPLSKMIALAEAVPDFARLDHDDLYRAIDIYLKAHPDLSKSERKRLCRILDCKKLSVEACMHAAQNELLPLRVVVQVLFFEQARAAMAGGQVTELPNNIKALLATHNVDPSRPPAPLSTTTTVAAEDQWSISGLKSPKSSLSTLRMKLAEDDDLEENDIHPDGIGRSSKLKALCSIPTRPKRMLSKLWSINRSASEKN* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0729 630 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Vvi1g0729 630 ProSiteProfiles NPH3 domain profile. 209 516 IPR027356 -
Vvi1g0729 630 PANTHER OS12G0117600 PROTEIN 23 552 IPR043454 -
Vvi1g0729 630 Pfam NPH3 family 210 492 IPR027356 -
Vvi1g0729 630 SUPERFAMILY POZ domain 21 115 IPR011333 -
Vvi1g0729 630 CDD BTB_POZ_NPY3-like 19 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0729 Vvi-Chr1 7324477 7327229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0729 26 522 EF-hand Containing Proteins AT3G44820 37.170 2.05e-94 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0729 - - vvi:100267978 1217.6