Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0728 ATGTTCATGTTGGGGAGTGAAGGAGATCACTATTGTTCCAAGAAGACGGATGATATCTGTGGAGATGTTTGTGGTCAGGAATCTAGCAGAGCTTTAAGCATGTCGAGACTCCGCTGCATCCTACGAGGCTTGGATTTTAAAACCTACATCTTTCTATTTGTCCTTGTCCCCACATGCTTCTTTGGTATCTACGTGCATGGGCAGAAGATATCCTACTTCCTGCGGCCACTATGGGAATCACCACCAAAACCCTTCCATGATATCACACATTATTATCAGGAGAATGTGACAATGGAGAACCTCTGCAAACTTCATGGTTGGGGGATCCGGGAATACCCAAGGCGTGTTTTTGATGCGGTGCTGTTTAGTAATGAACTGGATATTCTTACCCTGCGATGGAAAGAATTATATCCTTACATCACTGAATTTGTTCTCCTGGAGTCAAATTCAACATTCACTGGACTGCCAAAACCTCTTGTGTTTGCCAGTAATCGAGATAAGTTCAAATTTGTTGAGCCCCGGTTAACCTATGGGACTATTGGGGGAAGATTTAGGAGAGGGGAAAACCCTTTTGTTGAGGAAGCATATCAACGAGTAGCATTGGATCAACTTCTGAAAATAGCCGGTATTACAGATGATGACTTGTTGATTATGTCAGATGTTGATGAGATACCAAGCAAACACACTATCAATCTCTTGAGGTGGTGTGATGACATTCCGCCAATCCTACATCTTCGGCTGAAGAACTACCTATATTCTTTTGAGTTTTTCGTGGACAACAACAGCTGGAGGGCATCAGTTCACAGGTATCAGACTGGTAAGACTAGGTATGCACATTACCGCCAGACAGATGACATATTGGCAGATGCAGGATGGCATTGTAGCTTTTGTTTTCGCCATATCAGTGAATTCATATTCAAGATGAAAGCTTATAGCCATTTTGATCGGGTGAGGTTCTCCCATTATTTGAATCCTGAAAGAGTTCAGAAAGTAATCTGCAAGGGGGCTGACCTATTTGACATGCTTCCTGAGGAGTATACTTTCAAGGAGATCATTGGGAAATTGGGACCAATTCCTCATTCATACTCAGCTGTTCATCTTCCATCATATCTTCTGGAGAATGCTAAGAAGTATAAATTTCTCTTGCCTGGGAACTGCTTTAGAGAAAGAGAAAAGATTGACATTTCCTGGGCTTTTTCCCTTGGGAAGTTTTGTTTTGAGACTAATTTATCCATATATGTTGCAATTCAACTCCTTGATTTGTACCATTTCATTGCTTTTGGACCTCTTATTGATTATAATGTTGAATCTATTGTTACTTGCGGAAAATGCATCCCCATTAACCATCAAAGATTAGTTGTTAGGTATCAGAAGAACCGAATGCAACAGGGTGTCCGCTTCCAACAGCAGCGCTGTATCCTACACAGGAGGGAATGGCACTCAGCAAATGACTCCAACAATCATGTTTCAGGCACGCAACTGCTGGTGAAGCCATGTATTGATTCTCCTCAGCTGTTGGACGACCCCCACATCATGTTTAAGGAAGGCCACACTCTGCACCTGAGGGAATGGCACTCAGCAAATGACTCCAACAATCATGTTTCAGGTCCGCAACTGCTGCTAAAGCCACGTATCGAATTTCCACAGCTGTTGGACGACCCCCCTATCATGTTTAAGGAAGGCCACACTCTGCAATCAGGGGGATGGCATGTCAATAGCAGTCACCAAAACGGCTGGCACCACAGTGAAAAGTTGCCTATCAACTCTAACAATGATTTTGTGGTCATGCACCGTTTCCATGAAGTACATGTTCCTGTGAGAACCAGGGTGGTGCAGGTGGTGACGTATGAGCATCACACCTCTGCTAACAATTGTCACCACCAGCAGGTTTGCAATACCGAGAATAGGGGCTACCAGAAAGGTCCATGGCTGATGAAGGGCCTTGAGGAAGAGACATCTGATGTTATCAAAGTCTTCATAAAAAACTGA 1989 0.4354 MFMLGSEGDHYCSKKTDDICGDVCGQESSRALSMSRLRCILRGLDFKTYIFLFVLVPTCFFGIYVHGQKISYFLRPLWESPPKPFHDITHYYQENVTMENLCKLHGWGIREYPRRVFDAVLFSNELDILTLRWKELYPYITEFVLLESNSTFTGLPKPLVFASNRDKFKFVEPRLTYGTIGGRFRRGENPFVEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSKHTINLLRWCDDIPPILHLRLKNYLYSFEFFVDNNSWRASVHRYQTGKTRYAHYRQTDDILADAGWHCSFCFRHISEFIFKMKAYSHFDRVRFSHYLNPERVQKVICKGADLFDMLPEEYTFKEIIGKLGPIPHSYSAVHLPSYLLENAKKYKFLLPGNCFREREKIDISWAFSLGKFCFETNLSIYVAIQLLDLYHFIAFGPLIDYNVESIVTCGKCIPINHQRLVVRYQKNRMQQGVRFQQQRCILHRREWHSANDSNNHVSGTQLLVKPCIDSPQLLDDPHIMFKEGHTLHLREWHSANDSNNHVSGPQLLLKPRIEFPQLLDDPPIMFKEGHTLQSGGWHVNSSHQNGWHHSEKLPINSNNDFVVMHRFHEVHVPVRTRVVQVVTYEHHTSANNCHHQQVCNTENRGYQKGPWLMKGLEEETSDVIKVFIKN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0728 662 Pfam Glycosyltransferase family 17 44 389 IPR006813 GO:0003830|GO:0006487|GO:0016020
Vvi1g0728 662 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 33 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0728 Vvi-Chr1 7290772 7296178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0728 2 391 Glycosyltransferase AT1G12990 82.308 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0728 K00737 - vvi:100254142 824.698