Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0725 ATGATTTCTGTTATTAGTCCTAAAAGTTCACTTATTAGGACTGTAATTAGTCTAATCTTGAAGGCGGTTCGGCGGTTTAGTTTCGCCGGATCTTGGTCGTCTTCTTCGCCCTTTGTTCAACGTGATTTTCCTGCTGGTGTAATTGTTAGAAAACCAAATGAGACTATGAGGCTTATTGTAACAATTTCTGTTGGAGTTGTTTTTGGCTTTCTAATAGGAATATCTTTTCCAACTTTGTCAATAACTAAGCTGAATCTCCCATCCAGCCTTCTTCCCAACGTTGATATCGCTTACATTCGGGACAAAAGTTCAGGCTTTTCAACCCAAGCACTGTTGGATGCTTTGTCTTCTGCAAAGTACAACAGAACACAAGCTCAAAATTTAAATGGCACCTCAAAGATTTGGGCCCCTTCAAATCCTCGGGGTGCAGAAAGACTACCACCAGGCATTGTTGCAGCTGAGTCAGACTTCTACCTCCGTAGATTGTGGGGTAAACCTAGTGAGGACCTGACTATCAAACCAAAGTATCTTGTAACATTTACTGTTGGTTATGATCAGAAAAAAAATGTCGATGCAGCAGTTAAAAAGTTCTCTGAGGACTTTACCATCCTTCTATTTCATTATGATGGTCGAACAACTGAATGGGATGAATTTGAGTGGTCAAAGAGGGCCATTCATGTGAGCGTTCGGAGACAAACAAAATGGTGGTATGCCAAAAGGTTTCTGCATCCTGACATTGTGGCGCCATATGACTATATATTTATCTGGGATGAAGATCTAGGAGTTGAGCATTTTAATGCAGAAGAATATATAAGACTAGTGAGGAAATATGGCTTGGAGATTTCACAACCTGGTTTAGAACCTAATAAAGGGTTAACATGGCAGATGACAAAGAGAAGAGGTGATCGTGAAGTCCACAAAGAAACAGAGGAGAAACCGGGCTGGTGCCCTAACCCACATTTGCCTCCCTGTGCAGCGTTTGTTGAGATCATGGCTCCTGTATTTTCTAGAGATGCATGGCGGTGTGTGTGGCATATGCTTCAGAATGACCTGGTACATGGTTGGGGTCTTGACTTTGCTCTCAGAAGATGTGTAGAGCCTGCCCATGAGAAAATTGGAGTCGTAGATTCTCAATGGATCGTTCATCAAACTGTTCCCTCGCTTGGGAACCAGGGGCAAGCGGAGAATGGGAAGGCACCATGGCAAGGGGTGAGGGAGAGGTGTAAAAAAGAGTGGACCATGTTTCGAGTTCGCATGACCAATGCCGAAAAAGCATATTACAAGGAGATGGGAATTAATCCTACCAATTCCACAGCTGACTAG 1323 0.4308 MISVISPKSSLIRTVISLILKAVRRFSFAGSWSSSSPFVQRDFPAGVIVRKPNETMRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLLPNVDIAYIRDKSSGFSTQALLDALSSAKYNRTQAQNLNGTSKIWAPSNPRGAERLPPGIVAAESDFYLRRLWGKPSEDLTIKPKYLVTFTVGYDQKKNVDAAVKKFSEDFTILLFHYDGRTTEWDEFEWSKRAIHVSVRRQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIRLVRKYGLEISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCPNPHLPPCAAFVEIMAPVFSRDAWRCVWHMLQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQTVPSLGNQGQAENGKAPWQGVRERCKKEWTMFRVRMTNAEKAYYKEMGINPTNSTAD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0725 440 PANTHER OS06G0731900 PROTEIN 50 438 IPR007877 -
Vvi1g0725 440 Pfam Protein of unknown function (DUF707) 138 424 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0725 Vvi-Chr1 7268312 7277160 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0725 - - vvi:100243914 827.009