Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0724 ATGCTCCTCTCTGCAGTTACGCCCCAGACCCTCGTCGGTAACTCCGGCTCCAACACCACCTCCAGCAACTGTAATCTCCTCGTCTGCCCTAATAACCACAAAGTCCACAGCTTTTGCAGGCCGAACGGTTTTACTCAGAAGCCACTCATTCTCACCAACTCTTCCAATTCACTCGCCAACAACACCTCCCAGCTCCAAAACCCTAACTCCAACTCTAAGACGCTTCGTCATGACAGCCTCACTGATTCTGATGAAACTGAGGGAGCCATGGTTGCTTCGGCCTCCGCGGTGGCATCGGCCATACGCAGAGCTTCCACATCTCCTGTCGATTTCATCCAGAGGATCGAGAAGAATCAAAAGAACGGCCTGGTACTACCCAGCCCGGACTTTCAGAGACTCTGTCTCGAGCAATTGGACCTGTTTCACAGAATCGTTGATCCCAATGCCCTGCTTTCGGTCTATGTAAGGCCAGCTGGTAGTTATGTTATGGATCGTCTCGAGCTGCGTAGAGTTACTTTTTATCCAGGAGTTAATGGAGCTGACATTGTGATATTAGTTGGAAATTTTAGTATCCCGACAGGCTTTCGAGTGGCTGAAGCTGCCCTCTCTAATCAACAAGCAGAAGTTATACCAGAGTGTAGAGCTGTGGTTTTTCCTATGGTCAAACACCCATTTGTTGTGGGGTTTTTGGTTGCTGAGCTTCCAATGGTGGAAGATGAAAGGGAAAGGCACCCGGTAACACATTGCACCTCTCCCGATGAATCTTATGCTTTGCCTCCGCAATCAGATATGAAGTTAGGGGAAATTCAGGCTCTAGAAGAAGAAGGACTGAAATCTTACAAGTTTACCGAGGAGCAGAGATTAAATGCGATCAACATTTCTCGCTCTCTAGCAATGGCTTATGTTATGGATCAGAAAGCAATGTTACTCCAACAATCATCCTGGCAAAATAATGTCAGGATGAGTGATTTGGTTGAGCAAATCCGTGGTCCTCTTTCCAGTATTCGAACTTTAAGTAAAATGTTATCTCTTCACATGAAGAGAAGTGAGATTGCTAATGATATTGTTGAAGACATAGTGGTGCAAGGTGATCGCATGAGAGATGCCCTTCAACAACTGCAGGATGCTGTTCACCTGACAAAGGCTAATATAGTGCGATACAATGAGGAAACATTGAAGAAAATGTACAAATCAACTTATGCCCATGCTGATTCAGTTAATCAATTATCAGATAACTTTTGGAGGGAAACTTCCAGTAGTAAGGCAGAAGAATCTGGTGAACCACTTTCTTTAACTTCTGCAGCCAATGATTTAGACATGCCTACACCTCCTCTTGCTCTTGCACGTGTATCACAGCATGGCATCAGGAAGACCATGCAATGTTTATGA 1389 0.4536 MLLSAVTPQTLVGNSGSNTTSSNCNLLVCPNNHKVHSFCRPNGFTQKPLILTNSSNSLANNTSQLQNPNSNSKTLRHDSLTDSDETEGAMVASASAVASAIRRASTSPVDFIQRIEKNQKNGLVLPSPDFQRLCLEQLDLFHRIVDPNALLSVYVRPAGSYVMDRLELRRVTFYPGVNGADIVILVGNFSIPTGFRVAEAALSNQQAEVIPECRAVVFPMVKHPFVVGFLVAELPMVEDERERHPVTHCTSPDESYALPPQSDMKLGEIQALEEEGLKSYKFTEEQRLNAINISRSLAMAYVMDQKAMLLQQSSWQNNVRMSDLVEQIRGPLSSIRTLSKMLSLHMKRSEIANDIVEDIVVQGDRMRDALQQLQDAVHLTKANIVRYNEETLKKMYKSTYAHADSVNQLSDNFWRETSSSKAEESGEPLSLTSAANDLDMPTPPLALARVSQHGIRKTMQCL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0724 462 CDD HisKA 321 375 IPR003661 GO:0000155|GO:0007165
Vvi1g0724 462 MobiDBLite consensus disorder prediction 55 76 - -
Vvi1g0724 462 MobiDBLite consensus disorder prediction 423 437 - -
Vvi1g0724 462 MobiDBLite consensus disorder prediction 55 80 - -
Vvi1g0724 462 MobiDBLite consensus disorder prediction 415 438 - -
Vvi1g0724 462 Coils Coil 370 390 - -
Vvi1g0724 462 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 1 457 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0724 - - vvi:100249068 868.611