Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0721 ATGAAAATTATTTTTCTTAATAATTTATTTTTGTTAATATTTTTCTTTTCTTTAGTACTTTCAACAAACCAAACATATGATCCTCTGATAGAAGCAAAGGAGCCGCTACATACTGGTTCCCATCAGAGCAGGTTCGGTTGGATCTCTAATTGTCCCTTTTTCACTGTATTCTCCCTCATTCATATGGAGCCTCGCTACCCCAAGCTTCTTTGCTTTAGCTTCGCGCTCGTATTTTCATTCACGTTTCTTCCAAATCCTGTATCACCCTTAAGCCCTTGTAGTTTTCCGGCTGTTTTCAACTTCGGTGACTCTAATTCAGACACCGGAGGTCTGTCGGCGGCATTCGGCCAAGCCCCTTCCCCCAACGGAGAGACCTATTTCGGCGCTCCGGCTGGACGGTTCTCCGACGGACGTCTCATTATCGATTTCATAGCGGAAAGCTTGGGATTACCATATCTGAGTGCGTACCTGGATGCGTTGGGCTCAAACTTCAGCCATGGGGCCAATTTCGCTACCGCCGGATCTACCATCAGGCCCCAGAACACCACCATGGCCCAAAGTGGATACAGCCCAATATCATTAAACGTGCAGTTTGTAGAGTTCAGTGATTTTCGAAACAGATCACAAATATTTCGCAACCGAGGAGGGGTATTTCAAGAATTGTTGCCAAAAGAAGAGGACTTTGCGGCTGCTTTGTACACATTTGATATAGGCCAGAATGATCTCACGGCTGGATACAAGCTCAATATGACAACGGAGCAGGTTAAGGCATATGTGCCTGATCTACTGGATAGCTTATCCAACATCATCAAGTACGTACACGCACGAGGAGCAAGGTCATTTTGGATACACAACACTGGCCCAGTGGGCTGCTATCCTTACGTTATGGATCGTTTTCCTATTACTGCGGCCCAGGTGGATAAGCATGGCTGCGCCAGCCCGTACAATGAGGTAGCCCAATATTTCAACAGTAGGTTAAAAGGAGCGGTGGCCCAACTCAGAAAGGACCTTCCGGAGGCTGCAATCACCTACGTGGATGTGTATTCAGTGAAGTACCGCCTCATCAGCCAAGCGAGGAAGCAGGGCTTCATGGACCCTTTTAAGGTCTGTTGTGGGCATGGTGGGAAGTACAACTACAACCAGGCTTTCAAATGCGGGGCCAAGATTAAAGTGGGTGGAAAAGAAGTTGTGATCGCGAAATCGTGCGAGAATCCGAGGGTTCGGATTAGCTGGGATGGGGTCCATTTCACGGAGGCAGCCAACAAGTGGATTTTCGATCGAATTGTGGATGGCTCGTTTTCGGACCCACCAATTCCATTGAGAATGGCTTGTCACAGGGTGGACCACTGA 1350 0.477 MKIIFLNNLFLLIFFFSLVLSTNQTYDPLIEAKEPLHTGSHQSRFGWISNCPFFTVFSLIHMEPRYPKLLCFSFALVFSFTFLPNPVSPLSPCSFPAVFNFGDSNSDTGGLSAAFGQAPSPNGETYFGAPAGRFSDGRLIIDFIAESLGLPYLSAYLDALGSNFSHGANFATAGSTIRPQNTTMAQSGYSPISLNVQFVEFSDFRNRSQIFRNRGGVFQELLPKEEDFAAALYTFDIGQNDLTAGYKLNMTTEQVKAYVPDLLDSLSNIIKYVHARGARSFWIHNTGPVGCYPYVMDRFPITAAQVDKHGCASPYNEVAQYFNSRLKGAVAQLRKDLPEAAITYVDVYSVKYRLISQARKQGFMDPFKVCCGHGGKYNYNQAFKCGAKIKVGGKEVVIAKSCENPRVRISWDGVHFTEAANKWIFDRIVDGSFSDPPIPLRMACHRVDH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0721 449 Pfam GDSL-like Lipase/Acylhydrolase 98 428 IPR001087 GO:0016788
Vvi1g0721 449 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 24 437 - -
Vvi1g0721 449 CDD SGNH_plant_lipase_like 96 432 IPR035669 -
Vvi1g0721 449 SUPERFAMILY SGNH hydrolase 99 429 - -
Vvi1g0721 449 Gene3D SGNH hydrolase 88 431 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0721 Vvi-Chr1 7240959 7245197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0721 96 435 Acyl Lipid Metabolism Gene Families AT4G10950 25.140 4.27e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0721 - - vvi:100264465 801.586