Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0720 ATGGAGCTGCGCTTGAGAATACTTCTCTCTTTCATCGCCGTGGCTTTCAGCGTAGAGCCATCGAAGGTCTCAGCAACATGTGAGTTTCCGGCAGTATTTAATTTCGGAGATTCAAACTCTGATACAGGCGGTTTGTCGGCCGCATTTGGCCAGGCCGGGCCTCCCGCCGGTGAGACCTACTTCCACGCTCCTGCCGGACGCTACTCCGACGGCCGTCTCATCATCGATTTTATAGCGGAGAGTGTGGGGCTGCCATACTTAAGCGCCTTCCTTGATGCGCTGGGGTCCAACTTCACCCACGGGGCCAACTTCGCTACGGCAGGTTCCACCATTAGACCCCCCAACGCCACTCTTTCTCAAAGTGGCTTCAGTCCCATTTCCTTGAACGTTCAGTGGTACGAGTTCCACGATTTTCACCGTAGGTCCCAAATCATTCGTAACCGAGGAGGAGTTTTCAGTCAGCTGATGCCCAAGGAAGAATCCTTTTCCCGTGCTTTGTACACCTTTGACATTGGTCAGAACGATCTCACTTACGGTTACTTCAGTAACATGTCCACCGATCAAGTCAGAGCCTACGTCCCTGACGTTCTGGATCAGTTCAGGACTGTCATTAAGGATATTTACGACCAAGGAGGTAGGTCATTCTGGATCCACAACACAGGTCCGGTTGGGTGCCTACCTTATGTTATGGACCGGGTCCCAATCACAGCCGGACAAGTGGACAAATACGGTTGTGCGGATCCCTTCAATGAGGTGGCTAAATACTTCAACCTTAAGTTAAAGGAAATGGTACAGAAACTGAGGCAAGAGCTTCCGGAGGCTGCAATCACCTACGTTGATGTATATAGCGTGAAGTACACCCTCATTACCAAAGCAAAGAAATTTGGATTTGTACAACCGTTGAGAGCGTGTTGCGGGCACGGAGGGAAGTACAACTACAACATCCATGTGGGATGTGGAGGGAAGGTGAAGGTGGACGGGAAAGAGGTTGTGGTGGGATCGTGCAAAGATCCATCGGTTAAGATTAACTGGGATGGGGTCCACTTCACTGAGGCAGCAAATAAATGGATCTTTGATAAGATCGTGGGGGGTGAATTTTCGGACCCACCAATCCCATTGAATATGGCCTGCCAAAGGCACCCTGCCCAATGA 1152 0.5069 MELRLRILLSFIAVAFSVEPSKVSATCEFPAVFNFGDSNSDTGGLSAAFGQAGPPAGETYFHAPAGRYSDGRLIIDFIAESVGLPYLSAFLDALGSNFTHGANFATAGSTIRPPNATLSQSGFSPISLNVQWYEFHDFHRRSQIIRNRGGVFSQLMPKEESFSRALYTFDIGQNDLTYGYFSNMSTDQVRAYVPDVLDQFRTVIKDIYDQGGRSFWIHNTGPVGCLPYVMDRVPITAGQVDKYGCADPFNEVAKYFNLKLKEMVQKLRQELPEAAITYVDVYSVKYTLITKAKKFGFVQPLRACCGHGGKYNYNIHVGCGGKVKVDGKEVVVGSCKDPSVKINWDGVHFTEAANKWIFDKIVGGEFSDPPIPLNMACQRHPAQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0720 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 370 - -
Vvi1g0720 383 Gene3D SGNH hydrolase 17 363 IPR036514 -
Vvi1g0720 383 FunFam GDSL esterase/lipase At1g09390 20 366 - -
Vvi1g0720 383 Pfam GDSL-like Lipase/Acylhydrolase 32 361 IPR001087 GO:0016788
Vvi1g0720 383 SUPERFAMILY SGNH hydrolase 35 361 - -
Vvi1g0720 383 CDD SGNH_plant_lipase_like 30 364 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0720 Vvi-Chr1 7237369 7240204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0720 30 380 Acyl Lipid Metabolism Gene Families AT4G10950 29.201 6.70e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0720 - - vvi:100259265 775.778