Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0719 ATGGACTCTACTCTTTTCTTTCTGACACTCACAATTTCTGTGAGTTCAGTCCCGTGGTTGGTGTTGGCCACAGCCACAAGCTGTGATTTTCCGGCCATATTCAACTTCGGAGACTCAAATTCCGACACGGGTGGCTTGTCAGCAGTCTACGGCCAGGCCCCTCCACCCAATGGGGAGACATTTTTCCACAAGCCCGCCGGACGATACTCTGACGGCCGTCTCGTGATCGATTTCATGGCGGAGAGATTGGGACTACCGTACTTGAGCGCCTACCTTGATGCGGTGGGCTCCAACTTCACCCATGGGGCCAACTTTGCTACCGCAGGCTCCACCATTAGGCCCCAGAATACAACCTTTCAGCAAACTGGCTACAGCCCTATTTCCTTAAATATTCAATTCTACGAGTTCAACGACTTTCATCGTAGGTCACAGACTTACCGGAACCAAGGAGTTTTCGAGAAACTCTTGCCAAAGGAGGAGTTTTTCTCCCGTGCTTTGTACACCTTTGATATTGGCCAGAATGATCTCACGGCTGGTTACTTCCTCAACATGTCTGGTGATCAAGTTAGAGCCTACGTTCCTGATCTAATGAACCAGTTCAAAACTATCATTCAGTACGTGTACGATCAAGGAGGTCGATCATTCTGGATACACAACACAGGTCCCGTTGCCTGTCTACCGTATATCCTGGACCGCCTACCAATCACAGCTGGACAAGTGGACCACATTGGTTGCGTGGGTCCAGTCAATGACGTGGCCAAATACTTCAACACTAAATTAAATGAAACCGTGGTGGAACTCAGAAAGCAGTTCCCACTGGCTGCAATCACCTACGTTGACGTGTACTCAGTAAAATACACCCTCATCAGCAAAGCAAAGGAACTTGGATTTGTGGAACCACTGAAAGCTTGTTGTGGGCCTGGTGGCAAATACAACTACAACGTGAAGGTGGGTTGTGGGTGGAAGGGAGTGGTGGATGGCAGAGAAGTTGAGGGGACATCATGCAAAGATCCAACGGTCAAAATTAACTGGGACGGGATCCACTACACGGAGGCGGCCAACAAATGGGTCTTTGATCAGATTGTGGGCGGAGCATTCTCGGACCCACCTGTTCCACTAGCAATGGCCTGTCATAGGCAATAG 1143 0.4961 MDSTLFFLTLTISVSSVPWLVLATATSCDFPAIFNFGDSNSDTGGLSAVYGQAPPPNGETFFHKPAGRYSDGRLVIDFMAERLGLPYLSAYLDAVGSNFTHGANFATAGSTIRPQNTTFQQTGYSPISLNIQFYEFNDFHRRSQTYRNQGVFEKLLPKEEFFSRALYTFDIGQNDLTAGYFLNMSGDQVRAYVPDLMNQFKTIIQYVYDQGGRSFWIHNTGPVACLPYILDRLPITAGQVDHIGCVGPVNDVAKYFNTKLNETVVELRKQFPLAAITYVDVYSVKYTLISKAKELGFVEPLKACCGPGGKYNYNVKVGCGWKGVVDGREVEGTSCKDPTVKINWDGIHYTEAANKWVFDQIVGGAFSDPPVPLAMACHRQ* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0719 380 Gene3D SGNH hydrolase 21 364 IPR036514 -
Vvi1g0719 380 CDD SGNH_plant_lipase_like 31 364 IPR035669 -
Vvi1g0719 380 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 15 369 - -
Vvi1g0719 380 Pfam GDSL-like Lipase/Acylhydrolase 33 361 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0719 Vvi-Chr1 7234050 7236026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0719 31 368 Acyl Lipid Metabolism Gene Families AT4G10950 28.000 8.81e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0719 - - vvi:100264440 787.334