Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0718 ATGGCAGCAGCTGCGGTAATTGGAGTTGTTTTGGTTGCTCTACTCTCAGTTTTCTATGTGAATTGGAGACTTGACCGATCTAGTGGTTGCCACTTTCCGGCTATTTACAACTTTGGTGATTCAAATTCTGACACGGGCAGTGTTTCGGCTGTACTCCGTCGGGTTCCTTTTCCAAACGGGCAGAACTTTGGCAAACCATCTGGACGGTATTCTGATGGGCGCTTGATCATTGATTTTATAGCTGAAAACTTGGGATTACCTTACTTGAATGCATATCTAGATTCTATTGGAACGAGTTTCAGACATGGAGCAAATTTTGCTGCCACTGGGTCCACAATTCAGCCACCTCATCTCAGAATGTTTGAGGAAGTTTGTTACCCCCTTTCTCTCAACATTCAGCTACTGCAATTTGCACAATTCAAAGCTCGCACTACTCAGCTATACCCACAAGTTCAAAACTCGGACATTAAAAACACTCTCCCAAGACCGGAGGACTTCTCAAAGGCTCTTTACACTATGGATACTGGACAAAACGATCTTCATGATGGGTTTACCTCAATGACGGTAGAGCAAGTGCAGAAATCCATTCCAAACATAATCAATCAATTTTCTCAGGCCATAGAGCAACTCTACCAACAAGGAGCAAAAATATTTTGGATACACAATACAGGTCCCATTGGCTGCTTGCCCTTCTTTGTTATAAATTATCCTCCAAAGCCTGATAATGTTGACCAAACTGGCTGCATTAAGTCCTACAATGAGGTGGCTCAGGAGTTCAACAGGCAGCTTAAGGACATGGTGTCCCAACTAAGGAGCAAACTTGGAGATGCTCTACTTACTTACGTCGACATCTACTCAGCTAAATATTCCCTAATCAGTGAAGCCAAGATACATGGTTTTGTTGATCCTTTTGGGCAATGTTGTGGGCAAAATGGGAAGTTTCGAGAATGTGGGAAGAAGGCCGTAGTGAATGGGACTGAAGTTGATGGTGCCTCTTGTACTAATCCTTCAGAATACGTTAGCTGGGATGGCGTACATTATACTGATGCTGCAAACCAGTGGGTGGCCGGACACATTCTCAATGGTTCACTGTCTGATCCTCCACTCCCCATCTCTGAAGCATGTCACAAGCCTCTTCACTTGGAGCTGAAATAA 1155 0.4398 MAAAAVIGVVLVALLSVFYVNWRLDRSSGCHFPAIYNFGDSNSDTGSVSAVLRRVPFPNGQNFGKPSGRYSDGRLIIDFIAENLGLPYLNAYLDSIGTSFRHGANFAATGSTIQPPHLRMFEEVCYPLSLNIQLLQFAQFKARTTQLYPQVQNSDIKNTLPRPEDFSKALYTMDTGQNDLHDGFTSMTVEQVQKSIPNIINQFSQAIEQLYQQGAKIFWIHNTGPIGCLPFFVINYPPKPDNVDQTGCIKSYNEVAQEFNRQLKDMVSQLRSKLGDALLTYVDIYSAKYSLISEAKIHGFVDPFGQCCGQNGKFRECGKKAVVNGTEVDGASCTNPSEYVSWDGVHYTDAANQWVAGHILNGSLSDPPLPISEACHKPLHLELK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0718 384 Coils Coil 249 269 - -
Vvi1g0718 384 SUPERFAMILY SGNH hydrolase 35 361 - -
Vvi1g0718 384 Gene3D SGNH hydrolase 23 363 IPR036514 -
Vvi1g0718 384 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 367 - -
Vvi1g0718 384 Pfam GDSL-like Lipase/Acylhydrolase 35 357 IPR001087 GO:0016788
Vvi1g0718 384 CDD SGNH_plant_lipase_like 33 363 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0718 Vvi-Chr1 7230488 7232678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0718 33 366 Acyl Lipid Metabolism Gene Families AT4G10950 26.361 7.88e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0718 - - vvi:109122650 786.178