Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0711 ATGAACTTCGCGGTTTTGAGCTCCCTCTTTATCTTCTTCTCCCTTGTCTGCTTTCAAAGGCTATCAGCTAAACCTCTATCTAAGAATGAGGGAAAGCATGCTTGGTTCCCACCAAGAGGTTGGAACTCCTATGATTCCTTCAGCTGGATCATCTCTGAAGAAGAGTTCCTGAAAAGTGCAGAAATTGTTTCACAGCGGCTACGCCCTTTTGGATATGAGTATGTTGTGATTGATTACCTTTGGTATAGAAGAAAGGTGGAGGGTGCTTACACTGATTCTTTAGGATTTGATGTGATTGACAAATGGGGGAGGATGGCTCCTGATCCTGGCAGATGGCCTTCATCCAATGGTGGGAAAGGGTTCACTGAAGTGGCCAAGAAAGTACATAGCATGGGTTTGAAATTTGGGTTTCATGTTATGAGAGGAATAAGCACACAGGCAGTCAATGCAAACACCCCTATTTTAGATAGCATTAAGGGAGGAGTTTATGAAGAGAATGGTAGACAGTGGACGGCAAAAGATATAGCCCTTACAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACCAATTTGGGAGCTGGAAGGGCCTTCTTGAGATCACTATATAAACAGTATGCTGAGTGGGGTGTTGACTTTGTGAAACATGATTGTGTATTTGGTGATGACTTTGATCTAAATGAGATAACTGTTGTTTCAGAGGTTCTGAAAGAACTTGATCGTCCAATTATGTATTCTCTTTCTCCTGGAACCAGGGTGACACCTGCAATGGCCAAAGAAGTAAATGGACTAGTCAACATGTATAGGATTACAGGAGATGACTGGGATACTTGGGGAGATGTTGCTGCCCATTTTAACATTTCAAGGGATTTATCTACTGCTAATATGATTGGAGCTAAGGGCTTGCTGGGAAAGTCATGGCCTGACATGGATATGCTACCATTGGGAACACTAACAGATCCAGGTTCAAATGAAGGTCCACACAGAAAATGCAGACTAACTATAGATGAACAAAGAACTCAGATGACTTTATGGTCTATGGCAAAGTCTCCACTAATGTTTGGTGGAGATGTGAGGGATCTCGACGACCCTACATACAAACTTCTTACAAATCCCATCCTGCTGGAAATAGACTCTTTTAGCTCAAACAACAGGGAGTTTCCTTATGTCACTGGTATGAATGGTCCCAGAACTAGAAAGCAGATTCTTTCCCAGGGAATAAGAACATGCCTGACAAAGGTGGACAAATCAGACACTCGAGTTTTGGGTCTCACTAGCTGCAAGGATTCCAAGCCAAATGGTTGGTCTATCAAAACTCTTGGCCAAGACCTTGCACAAATCTGCTGGAACGATAAGTCAGGAAGCAGATATCTGGCACCTTATTGCTTATACAAGAGAAAACTTCCTTTGGCATTAGATGCAGAGATAATCTACAAGCAGAAATATCAAGGAAAACACCATTTATTAGCAACTGATGGGATGGAGTTGTGCTGGGACGCTTCTCCGAAAGGGAAACCTACTTCAAAGGAGTTCAATAGAGGTTCATTTTCACCCTGCAAATGGGATGCCAACCAGATGTGGGAGTTGAACAACAATGGCACCCTTTTAAACAGTCATTCTGGTCTATGTGCAACTGTGAATGCGGTGCAAGATGATGCTGTTTCTGGTGGAATTCGTTCTTGGATTGCAACTGGAAGAAAAGGAGAAATATATCTTGCCTTTTTCAATCTAAACCCTGAAAAGACCACAATATCTGCAAGCATATCAGATCTGGCTAAAGCGCTCCCGGGCAGAAATTTGAAGGTGAGTTCATGCAAGGGCAGTGAAGTATGGAGTGGAAAGGACTTGGGAATAATAGGAGGCTCAGTATCAATGACAGTAGAAATGCATGGCTGTGCACTATTTGTTTTGAAGTGCATCAGTTCCAGCTAA 1944 0.4275 MNFAVLSSLFIFFSLVCFQRLSAKPLSKNEGKHAWFPPRGWNSYDSFSWIISEEEFLKSAEIVSQRLRPFGYEYVVIDYLWYRRKVEGAYTDSLGFDVIDKWGRMAPDPGRWPSSNGGKGFTEVAKKVHSMGLKFGFHVMRGISTQAVNANTPILDSIKGGVYEENGRQWTAKDIALTERACAWMPHGFMSVNTNLGAGRAFLRSLYKQYAEWGVDFVKHDCVFGDDFDLNEITVVSEVLKELDRPIMYSLSPGTRVTPAMAKEVNGLVNMYRITGDDWDTWGDVAAHFNISRDLSTANMIGAKGLLGKSWPDMDMLPLGTLTDPGSNEGPHRKCRLTIDEQRTQMTLWSMAKSPLMFGGDVRDLDDPTYKLLTNPILLEIDSFSSNNREFPYVTGMNGPRTRKQILSQGIRTCLTKVDKSDTRVLGLTSCKDSKPNGWSIKTLGQDLAQICWNDKSGSRYLAPYCLYKRKLPLALDAEIIYKQKYQGKHHLLATDGMELCWDASPKGKPTSKEFNRGSFSPCKWDANQMWELNNNGTLLNSHSGLCATVNAVQDDAVSGGIRSWIATGRKGEIYLAFFNLNPEKTTISASISDLAKALPGRNLKVSSCKGSEVWSGKDLGIIGGSVSMTVEMHGCALFVLKCISSS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0711 647 PRINTS Glycosyl hydrolase family 27 signature 340 361 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 PRINTS Glycosyl hydrolase family 27 signature 31 50 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 PRINTS Glycosyl hydrolase family 27 signature 125 146 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 8 643 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 Pfam Alpha galactosidase C-terminal beta sandwich domain 560 641 IPR041233 -
Vvi1g0711 647 SUPERFAMILY Glycosyl hydrolase domain 559 642 - -
Vvi1g0711 647 CDD GH27 37 382 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 SUPERFAMILY Ricin B-like lectins 498 554 IPR035992 -
Vvi1g0711 647 Gene3D - 557 643 IPR013780 -
Vvi1g0711 647 SUPERFAMILY (Trans)glycosidases 33 381 IPR017853 -
Vvi1g0711 647 Pfam Alpha galactosidase A 207 381 IPR002241 GO:0004553|GO:0005975
Vvi1g0711 647 Gene3D Aldolase class I 28 385 IPR013785 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0711 9 475 Glycoside Hydrolase AT3G26380 68.308 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0711 - - vvi:100245809 1342.02