Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0710 ATGGCGGAGCTCCGTCACTCGAGCTCGATCGGAACCCGAGCTACGCCATCCCCGTTGAAGCGCGATGAGGACTCGTCCCCTTTCTTGCCCGACAACCCAACGGACCACTACGATCGTCACTCCTCACGAGATCGGGATCGCGACCGTCCCTTCTGGTCCAATTTTCACTCCATATGTCCATACTTCTCTGATGAGCCTAGGGTTTCTCCACATAACTACAAGATCTCGCTTTTCTGGATCCTTCTCGTCATTCTCGTCGGATTCATCTCAATTTCTGCTATTTTGAATGGTTTGAATTCTCCATACTTGTGTAGAAAAGATGGCATTGTTCTTCGCTGTCCGCGTGTCAAGGAACCTCCTTCACTCTGGGGCAATCCTTTTTCTGCCACCACCTCTTGGAAGCCTTGTGCTGAGCGCCGCAATGGTGGAATATCAGATCTTCCTCCTGAGAATGAAACAAGTGGCTATATATTTATCCATGCAGAGGGTGGCCTAAATCAGCAAAGAATTGCTATATGCAATGCGGTGGCTGTGGCTAAAATAATGAATGCCACACTTATTTTGCCATTGCTGAAGCAGGATCAAATCTGGAAAGACCAAACGAAATTTGAAGATATTTTTGACGTGGACCATTTCATTGATTACTTGAAGGATGATGTGCGAATTGTCCGTGATATCCCTGAGTGGTTCACAGACAAATCAGAGCTATTAACAAGCATAAGACGAACGGTAAAAAACATTCCGAAGTATGCTCCAGCACAGTTTTACATTGATAATGTTCTGCCTCGGATCAAGGAAAAGAAGATAATGGCCCTAAAACCTTTTGTTGATCGGCTTGGGTATGATAATGTTCCTCCAGAAATCAACAGGCTAAGGTGCAGAGTAAACTATCATGCTCTGAAATTTCTTCCTGAGATTGAGCAGATGGCTGATCAACTGGCATCAAGGATGAGAAACCGCACTGGCAGTTCAAATCCTTACATGGCCCTTCACCTTAGATTTGAGAAAGGGATGGTAGGCCTATCGTTCTGTGATTTTGTGGGCACAAGAGAAGAGAAAGCTCAGATGGCTGAATACAGGAAAAAAGAATGGCCTCGACGGTACAAGAACGGTTCCCATCTATGGCAGCTTGCCCTGCAGAAACGGAAGGAAGGACGTTGCCCTCTTGAGCCTGGGGAAGTGGCAGTGATTCTTCGGGCAATGGGCTATCCTAAAGAAACTCAAATTTATGTTGCTTCTGGAAAGGTCTATGGTGGGCAAAACCGGATGGCACCACTCAGGAACATGTTCCCAAATCTGGTTACAAAGGAAGAGTTGGCAACCAAAGAGGAGTTGGATGGTTTCAGGAAGCATGTGACAAGCTTAGCAGCCCTGGACTTCCTGGTTTGCTTGAAGTCTGATGTATTTGTGATGACCCATGGAGGCAACTTTGCAAAACTGATAATTGGTGCTCGTAGGTACATGGGTCATCAGCTTAAATCTATAAAACCGGACAAGGGGCTCATGTCCAAATCTTTTGGGGATCCTTACATGGGCTGGGCCACCTTTGTGGAGGATGTGGTTGTCACCCACCAGACACGAACGGGATTGCCTGAAGAAACTTTCCCAAATTATGACCTCTGGGAGAACCCTTTGACTCCTTGCATGTGTAGAGCCTGA 1659 0.4653 MAELRHSSSIGTRATPSPLKRDEDSSPFLPDNPTDHYDRHSSRDRDRDRPFWSNFHSICPYFSDEPRVSPHNYKISLFWILLVILVGFISISAILNGLNSPYLCRKDGIVLRCPRVKEPPSLWGNPFSATTSWKPCAERRNGGISDLPPENETSGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPLLKQDQIWKDQTKFEDIFDVDHFIDYLKDDVRIVRDIPEWFTDKSELLTSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINRLRCRVNYHALKFLPEIEQMADQLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAQMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGKVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHQLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0710 552 PIRSF UCP009360 39 552 IPR024709 -
Vvi1g0710 552 Pfam GDP-fucose protein O-fucosyltransferase 156 488 IPR019378 -
Vvi1g0710 552 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 100 551 - -
Vvi1g0710 552 CDD O-FucT_plant 156 490 IPR024709 -
Vvi1g0710 552 MobiDBLite consensus disorder prediction 17 45 - -
Vvi1g0710 552 MobiDBLite consensus disorder prediction 1 45 - -
Vvi1g0710 552 Gene3D - 295 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0710 Vvi-Chr1 7122124 7137221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0710 120 550 Miscellaneous Gene Families AT2G37980 37.054 1.60e-93 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0710 - - vvi:100257824 1123.23