Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0691 ATGGGGAAGTTCTTCTTCTGCTTCTTCTTTTCCTTTCTTTCTATTCTACCTCTTCCACTTCTGAAGCCTGTGGTGGCTCTACCACTCTACACCAATTCAAGGTGGATAGTGGACGAAGATGGTGCCCGGGTGAAGCTGGCATGCGTGAATTGGCCATCCCATCTGGAAGCAGTGGTGGCGGAGGGCCTCAGCAAGCAGCCAGTTGCCATGATCTCCAAGAAGATTGGGTCCATGGGGTTCAATTGTGTCAGGCTCACTTGGCCACTTTTTTTGGCCACCAATCAATCACTGGCCTCCCTCACTGTTAGACAGTCCTTTCAGAGGCTTGGCTTGCTTGAATCCATTGCCGGCTTCCAAGCCAACAACCCTTCCATGGTTGATCTTCCTCTCATAAGTGCTTACCAGGCAGTCGTGTCCGGCCTTGCGGACAACAATGTGATGGTCATACTAGACAATCACCTAAGCAAGCCGGGCTGGTGCTGCAGCAGCTTCGATGGCAATGGCTTCTTTGGCGACCAGTACTTCAACCCAGACTTGTGGGTCCAGGGCCTCACCCGGATGGCCACCATGTTCAGGGGCGTCACCAATGTGGTTGGCATGAGCTTGAGGAATGAGCTCCGAGGCCCCAAACAAAATGTGAAGGACTGGTACAGGTACATGCAGAAAGGAGCTGAAGCAGTGCACTCAGCTAACCCAGATGTTTTGGTCATAGTATCGGGCTTGAGTTACGACACAGACCTATCGTTCGTCCTGAAGCAAGAGTTGGAACTGACGTTCACAGGGAAATTAGTGTTCGAGATGCATTGGTATGGATTCACGGATGGGAGTGCTTGGGAAACCGGCAGCCCCAACCAGGTGTGCGGGAGAGTGGTAGAGAGCGTAATGAGGAGAGGAGGGGTTTTGCTAGAAAAAGGGTGGCCATTGTTTGTGAGTGAGTTTGGGGTGGATCAAAGGGGTACCAATGTGAATGACAATAGGTATTTGAATTGCTTCTTTGGCCTGGCAGCTGAACTGGACTTCGATTGGGCATTATGGACACTGGTAGGGAGTTATTATACGAGAGAAGGGGTTATTGGGTTGGAAGAGTTTTATGGTTTGCTGAATTGGAACTGGTGTGAAGTCCGGAACTCAAGCTTCTTGCAGAGGATTTCTGCCCTGCAGTCTCCTTTTCAAGGGCCAGATCTATCCGATGCCAGGCCACATAAAGTAATTTTCCATCCTGCAACGGGTCTTTGCATTGTATGGAAGTCAGTGTTTGAGCCATTAACGCTGGGTCCCTGTCCGGAGTCGGATGCCTGGAGCTACACCCCCCAGAAGACCTTGATAATGAAGGAAACGTATTTCTGCCTTCAAGCAGATGGGCCAGGGAATCCTGGAAAACTTGGTATAATATGCACTGAACCTGGTTCAAAATGGGAATCCATTTCAGATTCAAAGATGCACCTATCAACTAAGCTGGGAGATGGTACCACAGTTTGCTTGGATATAGACTCCAGCAACAACATTGTCACAAATGCTTGCAAATGCTTGAGTGGGGATAATAAGTGTGACCCTGGGAGCCAGTGGTTCAAGATTGTCAACGCCACAAATATTTCAACAAGACCTCTAATTCAGATCAGCTCCAACTTGGATTTGAATGGAGCTGAACATGCCAGCTAA 1659 0.4931 MGKFFFCFFFSFLSILPLPLLKPVVALPLYTNSRWIVDEDGARVKLACVNWPSHLEAVVAEGLSKQPVAMISKKIGSMGFNCVRLTWPLFLATNQSLASLTVRQSFQRLGLLESIAGFQANNPSMVDLPLISAYQAVVSGLADNNVMVILDNHLSKPGWCCSSFDGNGFFGDQYFNPDLWVQGLTRMATMFRGVTNVVGMSLRNELRGPKQNVKDWYRYMQKGAEAVHSANPDVLVIVSGLSYDTDLSFVLKQELELTFTGKLVFEMHWYGFTDGSAWETGSPNQVCGRVVESVMRRGGVLLEKGWPLFVSEFGVDQRGTNVNDNRYLNCFFGLAAELDFDWALWTLVGSYYTREGVIGLEEFYGLLNWNWCEVRNSSFLQRISALQSPFQGPDLSDARPHKVIFHPATGLCIVWKSVFEPLTLGPCPESDAWSYTPQKTLIMKETYFCLQADGPGNPGKLGIICTEPGSKWESISDSKMHLSTKLGDGTTVCLDIDSSNNIVTNACKCLSGDNKCDPGSQWFKIVNATNISTRPLIQISSNLDLNGAEHAS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0691 552 CDD RICIN 402 525 IPR000772 -
Vvi1g0691 552 Gene3D Glycosidases 27 388 - -
Vvi1g0691 552 SUPERFAMILY (Trans)glycosidases 28 383 IPR017853 -
Vvi1g0691 552 Pfam Cellulase (glycosyl hydrolase family 5) 67 347 IPR001547 GO:0004553|GO:0071704
Vvi1g0691 552 SUPERFAMILY Ricin B-like lectins 397 524 IPR035992 -
Vvi1g0691 552 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 18 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0691 Vvi-Chr1 6955433 6957962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0691 23 543 Glycoside Hydrolase AT1G13130 61.174 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0691 - - vvi:100244027 1111.67