Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0681 ATGAAGATGGAAAAGGTCATCCTCGTTGCTCTATCACTTGTTCTAGTGTTTGGTCTGGCTGAGAGCTTTGATTTTGATGAGAAGGATTTGGCTTCCGAGGAGAGTCTCTGGGACTTGTACGAGAGATGGAGGAGCTACCACACAGTTTCCCGTGACCTTGAAGAGAAGAATAAGCGCTTCAATGTGTTCAAAGAGAACACGAAGCATGTTCACAAGGTAAATCAGATGGACAAGCCTTACAAGTTGAAACTGAACAAGTTTGCAGACATGACCAACCATGAGTTCAGAAGCTCCTATGGTGGTTCTAAGGTTAAACATTATAGGATGTTACGTGGTGACCGGAGAGGCACTGGTGGATTCATGCATGAGAAAACCACCTATTTGCCACCATCTGTTGATTGGAGAAAGAAAGGAGCTGTCACTGGAATCAAAGATCAAGGCAAATGTGGAAGCTGCTGGGCATTTTCAACTGTAGTTGGCGTGGAGGGCATCAACCAAATCAAAACAAAGGAACTACTGTCTTTATCGGAGCAACAACTGATTGATTGCGACAGATCTGATGACCACGGTTGCAATGGAGGGCTAATGGAAAGCGCATTTGAATTCATTAAAAAAAATGGAGGAATAACAACAGAGAATAACTATCCATACAAAGCTAAAGATGAGAGATGCGACATGTTGAAGATGAATGCTCCCGTGGTGACAATTGATGGGCACGAAAGCGTACCAGTGAATGATGAGAGAGCCTTGATGAAGGCAGTTGCTCATCAGCCTGTATCGGTTGCAATAGATGCTGGTGGTTCGGATCTGCAGTTTTACTCAGAGGGAGTGTTTGACGGAGAATGTGGAACAGAGCTAGACCATGGGGTGGCAATAGTGGGGTATGGAACAACCCTGGACGGAACGAAGTACTGGATAGTGAAGAACTCATGGGGAGCTGAATGGGGTGAGAAGGGTTACATAAGGATGGCTCGGGGGATCCAGGCAGCCGAGGGACAGTGTGGTATAGCTATGGAGGCTTCCTACCCAGTCAAGTCCTCCAACAACACTAGAAGAGGATCAATAAAGGATGAACTCTAG 1080 0.4583 MKMEKVILVALSLVLVFGLAESFDFDEKDLASEESLWDLYERWRSYHTVSRDLEEKNKRFNVFKENTKHVHKVNQMDKPYKLKLNKFADMTNHEFRSSYGGSKVKHYRMLRGDRRGTGGFMHEKTTYLPPSVDWRKKGAVTGIKDQGKCGSCWAFSTVVGVEGINQIKTKELLSLSEQQLIDCDRSDDHGCNGGLMESAFEFIKKNGGITTENNYPYKAKDERCDMLKMNAPVVTIDGHESVPVNDERALMKAVAHQPVSVAIDAGGSDLQFYSEGVFDGECGTELDHGVAIVGYGTTLDGTKYWIVKNSWGAEWGEKGYIRMARGIQAAEGQCGIAMEASYPVKSSNNTRRGSIKDEL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0681 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 286 296 IPR025660 -
Vvi1g0681 359 Gene3D Cysteine proteinases 16 346 - -
Vvi1g0681 359 Pfam Papain family cysteine protease 128 344 IPR000668 GO:0006508|GO:0008234
Vvi1g0681 359 SMART pept_c1 128 344 IPR000668 GO:0006508|GO:0008234
Vvi1g0681 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 304 323 IPR025661 -
Vvi1g0681 359 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Vvi1g0681 359 SMART Inhibitor_I29_2 40 95 IPR013201 -
Vvi1g0681 359 FunFam Senescence-specific cysteine protease SAG39 20 345 - -
Vvi1g0681 359 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 146 157 IPR000169 -
Vvi1g0681 359 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 343 IPR013128 GO:0008234
Vvi1g0681 359 CDD Peptidase_C1A 129 343 IPR039417 -
Vvi1g0681 359 PRINTS Papain cysteine protease (C1) family signature 288 298 IPR000668 GO:0006508|GO:0008234
Vvi1g0681 359 PRINTS Papain cysteine protease (C1) family signature 304 310 IPR000668 GO:0006508|GO:0008234
Vvi1g0681 359 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Vvi1g0681 359 SUPERFAMILY Cysteine proteinases 32 344 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0681 Vvi-Chr1 6869741 6871249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0681 K16292 - vvi:100264473 741.88