Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0679 ATGCTACATGGGAATGGACTGCTTGGTAACATTTCCTTCTCAAGCGATACTCATCCATCGTTAGGTCATGGCACTGCGGATAATTGCAATCAAGACCCATCCTTCTATGTTGTCAGGGATGATTTGTTGCATCCACTGGTAAACGGTAATAAAGCAAGAAAACTGGATGGACTACTTCCTCTTGTTGAAGATCATTCAGTGACTGATGTGGTTTCATGTGGAGGTTGTCAAAGTGCACATGCAGCAGCAGTTGCTGTTTCATGTGCTGAGAGAGGACTAAAATCACATTTGCTGCTACGAGGGGAACGACCTGAAATTCTGACAGGCTACAATCTGATTTCCACATTATATGGAAATGTGAAATATGTTCCAAGATCTCTTTATGCCAAGAGGGAAGAAATGCTCACCAGGCATGCTGATTTGGTGGCAGGCAACAGTGGTTCTGTTGTGTGGTTCAATGATCTTCTTGAGACCTCTTTTACAACTCAAACATCTGGAAAACCAAATCTTGTGCAAATTGATGCTCATATGAATGCTGATAGTCATCCAAGAAAGGTTGCTATTATCAATGAAGGTGCAGCAGATGCTGTAGGTTTACTTGGTATGATTCGCCTTGTGCAGTACTTGTCCCAGAACCATTTATTTGGAAAGGAGAGGACCTTAAAAATTGTTGTAGATGCTGGTACTGGGACAACAGCTGTTGGTTTAGGACTTGGAGCCTTATGTTTAGGGCTCTCATGGGAGGTAACTGGAGTCATGTTGGCTGATACCGTTGATGGTTACAGAAAAAAGGAGAAATGCTTAATTTCCGATTTCAAGCACTGTACTGCTTTTCATCATATTGATCATGTCCTCAAGGGGATGGATGGTGGGATTGTTCATTGGGTAGAACGTGACCATCCAAGGAAATTCGGCAATGTGAAGAAAGGGGAAGTAGAAGCATGCCAACAAATTGCACAACAAACTGGTATTCTAGTGGATCCCATATATACTTTAGCTGCTTGGGAACTGGCAACACTACTTAGTCAAGAGGAAGCTAAAGGGGGTGCAAAAGTGGTGATGCTTCACACAGGGGGTACACTAGGCATGTTTGGATTAGCACAGAGGTACAAGTCTTACTTCCATGCAGTCAAAGATGGACTGCTTGTTTAA 1152 0.4288 MLHGNGLLGNISFSSDTHPSLGHGTADNCNQDPSFYVVRDDLLHPLVNGNKARKLDGLLPLVEDHSVTDVVSCGGCQSAHAAAVAVSCAERGLKSHLLLRGERPEILTGYNLISTLYGNVKYVPRSLYAKREEMLTRHADLVAGNSGSVVWFNDLLETSFTTQTSGKPNLVQIDAHMNADSHPRKVAIINEGAADAVGLLGMIRLVQYLSQNHLFGKERTLKIVVDAGTGTTAVGLGLGALCLGLSWEVTGVMLADTVDGYRKKEKCLISDFKHCTAFHHIDHVLKGMDGGIVHWVERDHPRKFGNVKKGEVEACQQIAQQTGILVDPIYTLAAWELATLLSQEEAKGGAKVVMLHTGGTLGMFGLAQRYKSYFHAVKDGLLV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0679 383 FunFam D-cysteine desulfhydrase 2, mitochondrial 50 151 - -
Vvi1g0679 383 Gene3D - 157 373 IPR036052 -
Vvi1g0679 383 PIRSF ACCD_DCysDesulf 161 376 IPR027278 -
Vvi1g0679 383 PIRSF ACCD_DCysDesulf 18 146 IPR027278 -
Vvi1g0679 383 Pfam Pyridoxal-phosphate dependent enzyme 32 358 IPR001926 -
Vvi1g0679 383 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 30 370 IPR036052 -
Vvi1g0679 383 Gene3D - 50 152 IPR036052 -
Vvi1g0679 383 FunFam D-cysteine desulfhydrase 2 mitochondrial 173 373 - -
Vvi1g0679 383 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 29 375 IPR027278 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0679 K05396 - vvi:100247322 740.339