Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0678 ATGCGGCCTCAACACGTGAATTCGGAGGCGCTCTCTGCCTCCGGCAGGACCTCCGAGAAACTGAGCCTCCCAGCGCTGCAATCCAAGATGAAGTGTGACCCAGAAGGTTACGAGTCCGAACTCCTCCTCCTCTACAGCCAATTCAACTCCTCCCTCGAGCTCTTCCAACAGCAAGCTGTCTTCACCTCCATCAGCGGCGTGGACACCGACCCCGCTGTCGCCAAGGACCTTGGCGACAGGGCCGTCTTCTTGTCTCACCTCACCCCATTTTACCCCAAACATCTCGCTGAGTTCCCCAAACAACTCGCTCAGTTCCTCCGCTCAACCGCTCGTTCGCTTCCATCGTCGCTTCGCTGCCATGTTGCTCAAGCCCTCATTCTTCTCATCAATCGGAAGATAGTTGATATTGGTGACACTCTTGCATTGTTCTTGGAGCTTCAAACTCTCGGTGATAGGGCTTTGAGAAAATTGGCATTTTCTCATGTTGTTCATAGTATCAAGAGAATGAACCAGAAGCATAAGAATGAGGCTCAGAATCGTGCACTTCAAAACATATTGTTTCCGATGCTACAGCAAGAGGATGAAGCACAAGCTAAGAGATCGCTTATCACACTTTGTGATCTTCATCGCAGAAAGGTGTGGTTTGATGATAGAACCGCCAATGCAGTCTGTACAGCATGTTTTCATTCATCATCGAGGATCATGATTGCTGCTTTATCCTTTCTTCTTGACTATGAAAAGATTGAAGATGATGATGACAGTGACGGTTCAAGCAGTGAAGATGAGACTCCCCAAAAGCCTCAAGTTGTCCTAAGTAAAGGGGATGTTTATAAGGCACACCATAAAGGTACACTTGCAAGCAAGAAGAAAAAAAAGGCAAAATTGCAGCGTGTGATTCGTAATATGAAAAGGAAGCAGCGCCTATCATCAGAAAAAGTGATTTCAAATAACTATTCACCACTTAACCATCTGAAAGATGCGCAGGGATTTTCTGAGAAACTATTCTCTCGTCTTCAAACATGCAATGAACGGTTTGAGGTTAAGATGATGATGTTGAAAGTAATTGCTCGAACAGTTGGGCTTCACCGGTTGATTTTACTAAATTTTTATCCTTTTCTCCAGAAATATGTTCAGCCCCATCAACGTGATGTCACAAATTTACTTGCAGCGGCAGTTCAGGCATGCCATGACATGGTGCCTCCTGATGCAGTTGAACCACTATTCAAACAAATCGTAAATCAGTTTGTACATGATCGTTCACGGACAGAGGCTATTGCTGTGGGACTGAATGTAGTAAGGGAAATATGTCTGCGCATACCTTTGTTGATGACGGAAGACTTGCTGCAAGACCTTGTTTTGTATAAGAAATCACATGAGAAAGCTGTTTCAACAGCAGCTCGTTCACTCATTACATTATTTAGAGAGATTTGCCCTTCTCTGCTGATTAAAAAAGATCGTGGACGACCTACTGACCCAAAGGCAAAGCCAAAAGCGTTTGGAGAAGTGAATGTTGTCAGTAGTGTTCCTGGTGCTGAGTTATTACAACATGATGATGATGATGATGATGATGATGATGTGAATGATGACAATTCTGATGAGACTGGATTCAGTGATTGTGATGATAGTCATGATAGTGATGTGAAGTTTGCTGCTAGTGATGGTGAACAAAATGAGCTAGACAATCATAATTCTGACCTTTTCAGAAAAGATAGCACTAATGATGTACAAGTTGCAGAAGTGGCTGAAGATGAAGATGGCAATAATATTACTGATGATGATTCTGTTGATGTCAGTGATGATGATGATGATGATGATGACAATGAGAGCGGCGGTAGTGGTGATGAGGATGATGATGATGGTGTCAGTGACGATGTTGATGGGGAAGAAGAGGAGGGGGAGAAGGAATTTAATGGTTCTCATAAAACTAATGACCATGATGATGGGAATGATGGTACTGGAGAAGAAAAATCTAAAGCAAGGAAGAGGAAGGCTTTGGATTTTGAGGGACAATTGAATGCTGCTGATACTAGTCTTCGGGCTCTTAAGAGATTAGCAGGGGCAAAGATGGGGCATGCCCCATTGGACTCAACAGATGGTATTCTTTCTAATGAAGACTTCCAACGGATTAAAGACCTAAAGGCAAAGGAGGAAGCCAAATTTGCTTTGGCTCAGCATGGGTTGTTAAGGAAAGGCTCAGATGCAAAATCAACAGGTTTTAAGATTCCAACTTCTGATCAGCTGAGTGTTAAACGAGTGGATCCTGCTATGCTTGAGGTTAATATAAGGAAAAAGCTAAGTAAAGAGGAAAGATTGGAACTGGTGAGAGCAGGGAGAGAGGACAGAGGGAAGTACCAGGCCCGAGCTGCAGTGAAACAGAAGAAGACTGGTGGTTTGAGCAATCGGCAGAAGGAACACAAGAAGGCCATGCCTCTAGCTGCTAAGCGATCCAAGATACAAAAATCACGAGAGGTGAAAAGGAAACAACAGCGTCGTTCTGGTAAACAGTTTCGTGGGAGGAAAGCATGGAAGTGA 2532 0.4396 MRPQHVNSEALSASGRTSEKLSLPALQSKMKCDPEGYESELLLLYSQFNSSLELFQQQAVFTSISGVDTDPAVAKDLGDRAVFLSHLTPFYPKHLAEFPKQLAQFLRSTARSLPSSLRCHVAQALILLINRKIVDIGDTLALFLELQTLGDRALRKLAFSHVVHSIKRMNQKHKNEAQNRALQNILFPMLQQEDEAQAKRSLITLCDLHRRKVWFDDRTANAVCTACFHSSSRIMIAALSFLLDYEKIEDDDDSDGSSSEDETPQKPQVVLSKGDVYKAHHKGTLASKKKKKAKLQRVIRNMKRKQRLSSEKVISNNYSPLNHLKDAQGFSEKLFSRLQTCNERFEVKMMMLKVIARTVGLHRLILLNFYPFLQKYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRTEAIAVGLNVVREICLRIPLLMTEDLLQDLVLYKKSHEKAVSTAARSLITLFREICPSLLIKKDRGRPTDPKAKPKAFGEVNVVSSVPGAELLQHDDDDDDDDDVNDDNSDETGFSDCDDSHDSDVKFAASDGEQNELDNHNSDLFRKDSTNDVQVAEVAEDEDGNNITDDDSVDVSDDDDDDDDNESGGSGDEDDDDGVSDDVDGEEEEGEKEFNGSHKTNDHDDGNDGTGEEKSKARKRKALDFEGQLNAADTSLRALKRLAGAKMGHAPLDSTDGILSNEDFQRIKDLKAKEEAKFALAQHGLLRKGSDAKSTGFKIPTSDQLSVKRVDPAMLEVNIRKKLSKEERLELVRAGREDRGKYQARAAVKQKKTGGLSNRQKEHKKAMPLAAKRSKIQKSREVKRKQQRRSGKQFRGRKAWK* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0678 843 MobiDBLite consensus disorder prediction 250 271 - -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 797 811 - -
Vvi1g0678 843 SUPERFAMILY ARM repeat 82 533 IPR016024 -
Vvi1g0678 843 Pfam NUC130/3NT domain 83 134 IPR012977 -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 633 668 - -
Vvi1g0678 843 Coils Coil 285 308 - -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 577 632 - -
Vvi1g0678 843 PANTHER HSDA/SDA1-RELATED 17 840 IPR027312 GO:0000055|GO:0042273
Vvi1g0678 843 MobiDBLite consensus disorder prediction 536 569 - -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 777 843 - -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 515 535 - -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 812 843 - -
Vvi1g0678 843 Pfam SDA1 443 840 IPR007949 -
Vvi1g0678 843 MobiDBLite consensus disorder prediction 513 672 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0678 K14856 - vvi:100252440 1490.71