Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0669 ATGGCAGCAACCATAGCGACAATGGCCATGCTCAACGCCAAATGCTTGAGCATCAATTCTCCCAAGAACCTCAACCTCTCCAAGCCAACCGCAAAACCCATCTCCCTCCTCTCCATCCAGAACCTCCCAAAAGGCCTCACCACCCTGAAATCATCCGAGAACCAAAACTTGTCAACTTCCCTAGCAGGTACTGCCATCGCCGGAGCCATCTTCTCGACCTTGAGCTCCTGCGATCCTGCCTTGGCAGCTCAACAAATCGCGGAGATAGCCGACGGCGACAACCGTGGCCTCGCGCTTTTGCTGCCTATAATCCCAGCCATAGCTTGGGTGCTCTTCAACATCCTCCAACCAGCTCTCAACCAGTTGAACAAAATGCGCAGCACCAAGGGGGTCATCATCGGGCTTGGCCTTGGTGGATTGGCGGCATCAGGGTTCATGTTGACGCCCCATGCATCAGCCAGTGAAATTGCCACGCTTGCAGATGCTGCGTCTTCTGATAACCGGGGACAGCTTCTGCTCTTTGTTGTGACTCCAGCTATTCTCTGGGTTCTGTACAATATTCTACAACCGGCTCTGAACCAGCTCAACAGGATGAGATCTGAATGA 606 0.533 MAATIATMAMLNAKCLSINSPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLSTSLAGTAIAGAIFSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRSTKGVIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPAILWVLYNILQPALNQLNRMRSE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0669 201 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 IPR038760 GO:0009523
Vvi1g0669 201 Hamap Photosystem II protein Y [psbY]. 93 127 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Vvi1g0669 201 Pfam Photosystem II protein Y (PsbY) 93 125 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Vvi1g0669 201 Pfam Photosystem II protein Y (PsbY) 166 198 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0669 K02723 - vvi:100252545 360.533