Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0628 ATGGGAAGCATTCCGGAGAAGGCCCTGGGATCAACAGGAAAAGCCATACCTCTGGTGGGCATGGGCACAGCTGTGTATCGTTCTGCCCCTTCGGAAACGAAAGACTCTGTTCTCCATGCAATAAAGGTTGGCTATCGACACTTCGACACAGCTTCTGTTTACAACTCCGAGAAACCCCTTGGTGAAGCCATAAAAAAGGCTTTACAGATTGGGCTCATTAATTCGCGGGATGAGCTTTTTGTCACGTCAAAGCTTTGGGGAAACAAAGCACACCCCCACTGCGTCCTTCCTACACTGCAACAAACACTCAAGAATCTTGAACTGGAGTACCTTGATCTCTATCTCATTCATTGGCCACTAAGCATGAAGCCTGGAAATTTTGAGTTTCCCGTGAAGAAGGAGGACCTTCTCCCCATGGATTATGCGTCCGTTTGGAAAGACCTGGAAGACTGTCAGAAGCTCGGTCTCACCAAAGCAATAGGTGTAAGCAACTTCTCAAGCAAAAAGCTTGATGACTTGCTCCGCATAGCCACAATCCCTCCGGCCGTCAATCAAGTGGAGATGAACCCACTTTGGCAGCAGAAGAAGCTTAGGGAGTTCTGTACAGAGAAAGGAATCCACATCACGGCCTACTCTCCTTTGGGTGCCAGAGGAACACCGTGGGGAGGTGACAGAGTTATGGAATGTCAAGTCCTGAAAGAAATTGCCCAAGCAAGAGGCAAAACGATTGCTCAGGTTTGTTTGAGGTGGATATACGAACAAGGTGTGAGTGTTGTCGTGAAGAGTTTCAACAAGGAAAGAATGAAAGAGAATCTAGCGATATTCGATTGGGAGCTAACAGCGGAGGATATACAGAAAATAGATCAAATTCAGCAATTTAAAGGGGTTCCAGCTCTGGAATTCATTAGCGATGAAGGCCCCTACAGGTCTCTCGTGGAACTGTGGGATGAGGAGATTCAATTCTGA 966 0.472 MGSIPEKALGSTGKAIPLVGMGTAVYRSAPSETKDSVLHAIKVGYRHFDTASVYNSEKPLGEAIKKALQIGLINSRDELFVTSKLWGNKAHPHCVLPTLQQTLKNLELEYLDLYLIHWPLSMKPGNFEFPVKKEDLLPMDYASVWKDLEDCQKLGLTKAIGVSNFSSKKLDDLLRIATIPPAVNQVEMNPLWQQKKLREFCTEKGIHITAYSPLGARGTPWGGDRVMECQVLKEIAQARGKTIAQVCLRWIYEQGVSVVVKSFNKERMKENLAIFDWELTAEDIQKIDQIQQFKGVPALEFISDEGPYRSLVELWDEEIQF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0628 321 ProSitePatterns Aldo/keto reductase family signature 2. 148 165 IPR018170 GO:0016491
Vvi1g0628 321 Gene3D - 6 299 IPR036812 -
Vvi1g0628 321 FunFam NAD(P)-linked oxidoreductase superfamily protein 6 306 - -
Vvi1g0628 321 ProSitePatterns Aldo/keto reductase family putative active site signature. 259 274 IPR018170 GO:0016491
Vvi1g0628 321 ProSitePatterns Aldo/keto reductase family signature 1. 44 61 IPR018170 GO:0016491
Vvi1g0628 321 CDD AKR_AKR4A_4B 12 292 IPR044497 GO:0016616
Vvi1g0628 321 PIRSF AKR 6 312 IPR020471 GO:0016491
Vvi1g0628 321 SUPERFAMILY NAD(P)-linked oxidoreductase 8 297 IPR036812 -
Vvi1g0628 321 PRINTS Aldo-keto reductase signature 182 211 IPR020471 GO:0016491
Vvi1g0628 321 PRINTS Aldo-keto reductase signature 148 165 IPR020471 GO:0016491
Vvi1g0628 321 PRINTS Aldo-keto reductase signature 40 64 IPR020471 GO:0016491
Vvi1g0628 321 PRINTS Aldo-keto reductase signature 101 119 IPR020471 GO:0016491
Vvi1g0628 321 PRINTS Aldo-keto reductase signature 226 250 IPR020471 GO:0016491
Vvi1g0628 321 Pfam Aldo/keto reductase family 20 291 IPR023210 -
Vvi1g0628 321 PANTHER ALDO/KETO REDUCTASE 11 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0628 Vvi-Chr1 6262133 6263898 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0628 K22374 - vvi:100247586 644.81