Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0623 ATGCCCCAATCATCCGGGTCGAAGGCCTTGACCATAACCTCACTTGTGGTGAGGCTCCTGACCTTGATTTTCCTCCTAGCATCTCTCATAGTCATAGCCACAGACTCTGCCACCATGAAGATCGACTTCACGGAAGTAAAAATTAGGTTAAAAAATGTGTATTCCTACAGGTACATGGTTTCAGTAGCCGTGATTGGACTGGCCTACACCTTTTTGCAAATTCCCTTTGCAGTCCACTATGCGTGCACAGGAAAACGCCTAGGAGCCCATGATGGGCTTCTCAAGTTTGAATTCTTTGGTGACAAGGTTGGTCAGCTTCCTCCTTTTCAAGTTTCCTGA 339 0.4661 MPQSSGSKALTITSLVVRLLTLIFLLASLIVIATDSATMKIDFTEVKIRLKNVYSYRYMVSVAVIGLAYTFLQIPFAVHYACTGKRLGAHDGLLKFEFFGDKVGQLPPFQVS* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0623 112 Pfam Casparian strip membrane protein domain 8 103 IPR006702 -
Vvi1g0623 112 PANTHER CASP-LIKE PROTEIN 4A4 4 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0623 Vvi-Chr1 6222373 6222806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0623 - - vvi:100266415 191.045