Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0588 ATGGGGTTATCATCAGCGAACACTGTTGTAAACGAAGGCTTCCAGTTTTGCATATTTGATTTGAGAAGGGGGCAACACGAAGGGCAGGAGCTGGACAAGATTTTGTTCTTCTATCCAGCTGATTTGCCCTTTTCTACGCAGCTTTCCGTGATAGGGCTCAGCGAAGGGCTCATCACTTTTACAAGAATCTTTTCTCCAGAGGCTGCTTGTGAGGTTATAGAAGCAGAGAGGCATTCTCATGTTTTTCATCAGGCTGAGCCAGATATTTGGATGGTCATGGTAGTGGAGAAAAGTAAGGAGTCAGATGCGATATGGCGGATTGATGCATTGCGAAGAGTTCTTAAAGAAGTACATTCTCTTTTTGTGATGTTTCATGGATCAATAAGATCGTTGCTTGACAAAGAACCCAGTGGAGAACTTGTTCGATCTCATTTGTATGCTTTCATCATGGATTATCTTAGCGCATTTCAAAAGCGGTCTCCGTGGGATATTTGCTGCTGCGATTTTCTTGTTGGAAAAAAAATCAAGTTACCATCTTTCCGTGACTGCTTAAAGGAGCGTGGAACTGTGCAGATGCTAACTGTAGGGCGGGAGGCTGCACTTGAAGTTCAGTCACTTGTCAGAGTACTGGAATCATGTGCTGGGAACGCACCATGCTACTCACTTGTCTTATTTCAGGACCTTCTGGTGTCCACAACACTTTCACCTGATGACACCATAAACTTATTTACTTATGCTGTCCTAAGGTTGGCCCCAAATGCTCTGTTGTCCCGAGCAAGTTCGTGGTCCTATTTACGCAAAGGAAATACTGCATCTCAGATTGCTGCAGCATCTGTCATGGCAAGCTCTGGTTCTGTTTCAGAACAATTTTATGGCTCCCGTGATACCTCTCCTCATGGTGGAGAACGCAGTCATGTTGTGAGGCCCTTACAGCACAACAAGTGGTACAAGGGGACAGATGGCTTTCTTGTTACTGATATCTGGGGTCCAGAAGTTGGTAGCATGGTTTCTGCCACTCCAACAGTTTTGCTGCATCAGACAGAGGAGAGAATGTATCTCTGTGTTTATCAGCATAAAAGCCTCACTTTAATTCTTCTCTTTCCCATTAGTTCAATTCTGAATGGGGAGCAAGGGATTTCTGTGGTCAAGCAGCAAATTGTGGAAAATGCATCACTAAAGATGTTGAAAGTGGAAGAGAAACTATCAAAAGGATGGGGAGGTGAAAATGCATATCATGTTGGGGGTTATCGTTACTTACTGGTGGATGGTGACAGAAATGTATCTAGGGCTTCTCCACCGGGAAAAGTTACAACCCTAACAAAGGAATCTTTAATTTCCTTAAGTAATCTTAGAGAAGAGATTGATTTGGAAAAGAGTAGAGCAAAGTGGGATGACCCTGACCATGAGAAAGATTTGGAAATATGTATTAGAGCAAAAAATAATGCTTGGGTCATTGCACGGACTACAAGAGGAAAAGAGCTTTATATGGTTCTAGAGAAAGCCAATGAAACACTTCTTTTCGCCTCTGATGCCATCGAGAAGTTCAGCAACAGGTATTGCAGTGGAGCTTTTTCTTTGGATTAG 1584 0.4312 MGLSSANTVVNEGFQFCIFDLRRGQHEGQELDKILFFYPADLPFSTQLSVIGLSEGLITFTRIFSPEAACEVIEAERHSHVFHQAEPDIWMVMVVEKSKESDAIWRIDALRRVLKEVHSLFVMFHGSIRSLLDKEPSGELVRSHLYAFIMDYLSAFQKRSPWDICCCDFLVGKKIKLPSFRDCLKERGTVQMLTVGREAALEVQSLVRVLESCAGNAPCYSLVLFQDLLVSTTLSPDDTINLFTYAVLRLAPNALLSRASSWSYLRKGNTASQIAAASVMASSGSVSEQFYGSRDTSPHGGERSHVVRPLQHNKWYKGTDGFLVTDIWGPEVGSMVSATPTVLLHQTEERMYLCVYQHKSLTLILLFPISSILNGEQGISVVKQQIVENASLKMLKVEEKLSKGWGGENAYHVGGYRYLLVDGDRNVSRASPPGKVTTLTKESLISLSNLREEIDLEKSRAKWDDPDHEKDLEICIRAKNNAWVIARTTRGKELYMVLEKANETLLFASDAIEKFSNRYCSGAFSLD* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0588 527 Pfam First Longin domain of INTU, CCZ1 and HPS4 16 126 IPR043987 GO:0016192
Vvi1g0588 527 PANTHER UNCHARACTERIZED 1 526 IPR013176 GO:0016192|GO:0035658
Vvi1g0588 527 Coils Coil 498 518 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0588 - - vri:117916664 1034.63