Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0532 ATGTACCAAAACGATTACCAGAAATTCTCGGCTTCACCTCCGCCCTCAGCGCCTCCTTATACCTCCATTCAACCAGAGGTGGCCACTGGTATTCCGATTATCTCCACCGGCAATCTTCAACCTGGAACTGAGGTCCCTTGGTCCACCTGCCTTTGTGGTTGCTGCTCCGACGTCTCAAACTGTTGTATTACGTGCTGGTGCCCGTGCATTACTTTTGGGCGGATCGCTGAGATTGTTGATAAAGGAGCAGTGAGTTGTTGTGCAAGCTGCGCCGTTTACGCAGCACTTGCATGTTGTGCCTGTCTCTTCTCCTGCTCCTACCGCACCAAATTGAGGAAGCAGTTCATGTTGAAAGGGTGCTCATGTGGAGACTGCCTTGTTCATTGCTGTTGCGAGACATGTTCTTTGTGTCAGGAGTACCGCGAGCTCACTCACCGTGGTTTCGACATGTCCCTGGGTTGTTTGACAATGTGGTGTCCATGCGTTACTTTTGGGCAGATTGCTGAGATTGTGGATAGAGGAAATACGTCTTGTTTTGTAGCAGCCACGCTTTATGCAATTGTAGGTTTATCTAAGTGGGGATTTTGTCTCTCATGCTTCTATCGCACTAAAATGAGGAAGCAATTCATGTTGGAGAAGAGCCCTTGTGACGATTGCCTTGTTCACTGGTTTTGCGAGCCTTGTGCCTTGTGTCAAGAGCATCGCGAGCTCAAAATCCGTGGATTCAACCCCAGTATCGGATGGCATGCAAATATGGACAATCAGCAGGGAGTGGAGGTGGCCCCCAAGGTGGAAGAAGGCATGAACCATATTAAAAAAATTATAACCTGA 831 0.4874 MYQNDYQKFSASPPPSAPPYTSIQPEVATGIPIISTGNLQPGTEVPWSTCLCGCCSDVSNCCITCWCPCITFGRIAEIVDKGAVSCCASCAVYAALACCACLFSCSYRTKLRKQFMLKGCSCGDCLVHCCCETCSLCQEYRELTHRGFDMSLGCLTMWCPCVTFGQIAEIVDRGNTSCFVAATLYAIVGLSKWGFCLSCFYRTKMRKQFMLEKSPCDDCLVHWFCEPCALCQEHRELKIRGFNPSIGWHANMDNQQGVEVAPKVEEGMNHIKKIIT* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0532 276 Pfam PLAC8 family 150 236 IPR006461 -
Vvi1g0532 276 Pfam PLAC8 family 47 142 IPR006461 -
Vvi1g0532 276 PANTHER DUF614 FAMILY PROTEIN-RELATED 45 152 IPR006461 -
Vvi1g0532 276 NCBIfam uncharacterized Cys-rich domain 46 144 IPR006461 -
Vvi1g0532 276 NCBIfam uncharacterized Cys-rich domain 149 238 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0532 Vvi-Chr1 5078561 5087724 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0532 - - vvi:100264648 302.753