Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0507 ATGGGTCTAGTAGGTAAGCTTCAGGCTGAAACTCTCATCGTGGCTCCTGCTGATAAGTTCCATGAAATGTTCTCGTGCAGACCACACCACATCTCTAATGTCTGTCCTGAAAAGATTCAGAAAGTTAATCTGCATGAGGGTGAATGGGGCACTTCCGGCTATGTTATCGAGTGGAACTATAATATCGATGGGAATGATCATGTAGCCAAACAGATTGTAGAAATTACAGATGGGGAAAACAAATCTATCACTTATAAATTCATTGAAGGAGATCTCCTGAAGAAATACAAAAGCTTCATAATCGTAGTTCAAACAATTCCAAAGGGTGATGCCACTTGGGTGCATTGGACTTTAGAGTATGAGAAATTAAACAAAGATATCCCGACTCCAATTAAAGAGCTTGAATTTTTAGTTCTTGTTGGCGAGGGTGTTGATGATCATCTTGTCCAAGCATAG 456 0.3991 MGLVGKLQAETLIVAPADKFHEMFSCRPHHISNVCPEKIQKVNLHEGEWGTSGYVIEWNYNIDGNDHVAKQIVEITDGENKSITYKFIEGDLLKKYKSFIIVVQTIPKGDATWVHWTLEYEKLNKDIPTPIKELEFLVLVGEGVDDHLVQA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0507 151 Gene3D - 1 150 IPR023393 -
Vvi1g0507 151 CDD Bet_v1-like 5 148 - -
Vvi1g0507 151 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Vvi1g0507 151 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Vvi1g0507 151 SUPERFAMILY Bet v1-like 1 150 - -
Vvi1g0507 151 PANTHER MLP-LIKE PROTEIN 423 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0507 Vvi-Chr1 4819725 4821147 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0507 - - vvi:100853085 317.005