Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0497 ATGGCTCAGATAGCTAAGATGGAAGCCCAAGTAGAGATAAAGTCCCCTTCCAATAAGTTCTACGAGGTCTTGAGCAGCAAAGCTCATCTCCTTCCCAAGGCCTGCCCCGACAAAATCAAGAGCATCGAAGTGGTTGAAGGTGATTGGAAGAGTGCGGGCTCTGTCAAGCTCTGGACTTACTGTATCGGTAAGGCAATGCTAACCATTATTCCCATGCCACCCTCAATCAAACAAAATACAACACTCAGCATATGGGCCTTCTTGTTTTTAATAATGATTGCATTGGAAGGTAATAACGAAACAAAAGGAATGACCCTTCCTATCATGTAA 330 0.4394 MAQIAKMEAQVEIKSPSNKFYEVLSSKAHLLPKACPDKIKSIEVVEGDWKSAGSVKLWTYCIGKAMLTIIPMPPSIKQNTTLSIWAFLFLIMIALEGNNETKGMTLPIM* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0497 109 Pfam Pathogenesis-related protein Bet v 1 family 5 66 IPR000916 GO:0006952
Vvi1g0497 109 SUPERFAMILY Bet v1-like 5 64 - -
Vvi1g0497 109 Gene3D - 1 79 IPR023393 -
Vvi1g0497 109 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0497 Vvi-Chr1 4729364 4729693 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0497 - - vvi:100266230 115.931