Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0495 ATGCTACTTGCTGAAAGGCTTGAACTCCAAACGGAGATAAAATCTTCTCCAGACAGGATATTCGACATTTACAAGAACAAGACCAGCCTCATGCCTAAGATCAGCCCTGACAAGCTAAAGAGCATTGAAGTACTCGAGGGAGATGGAAAGAGTGTGGGCTCTGTCAGGCTCTGGACCTATGTCATGGGTGGTGCCGTAATTGCCAAGGATAAGATCGTTGCCATAGACGAGGAAAAAGGGTCCATGACGTTCGACCTCATAGGTGGTGAGGTGACAAATTATTACAAGAGTTTCAAGGCCACCATCGAGGCTACTTCAGAGGCACATACGAATTTGGTGAAATGGAGTCTGGAATATGAGAAAGCAAATGAAACTGTCCCCTCCCCGGAGTCTCATCTTGCCTTTCTTCTCGATGTTTCTAAGGAGGTGGATGCATACCTTCTCAAGATATAA 453 0.4592 MLLAERLELQTEIKSSPDRIFDIYKNKTSLMPKISPDKLKSIEVLEGDGKSVGSVRLWTYVMGGAVIAKDKIVAIDEEKGSMTFDLIGGEVTNYYKSFKATIEATSEAHTNLVKWSLEYEKANETVPSPESHLAFLLDVSKEVDAYLLKI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0495 150 SMART Bet_v_1_2 2 150 IPR000916 GO:0006952
Vvi1g0495 150 SUPERFAMILY Bet v1-like 2 149 - -
Vvi1g0495 150 CDD Bet_v1-like 7 148 - -
Vvi1g0495 150 Pfam Pathogenesis-related protein Bet v 1 family 4 149 IPR000916 GO:0006952
Vvi1g0495 150 Gene3D - 1 149 IPR023393 -
Vvi1g0495 150 PANTHER MLP-LIKE PROTEIN 423 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0495 Vvi-Chr1 4722336 4723231 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0495 - - vvi:100252471 286.189