Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0468 ATGGCCACCATTCCGGATGACATGGAAGTGGAAGCTCATTTCTTGGCAAAGGAGGATGGGATCGTTGCTGGAATTGCGCTTGCAGAGATGGTATTTAACGAAGTTGATCCTTCACTGAAGGTGGAGTGGTCCCAAAAGGATGGAGATTATGTTCACAAAGGACTCAAGTTTGGCAAAGTACATGGTCGAGCACACAACATTGTTAGAGCAGAGAGGGTTGTGCTAAATTTTATGCAACGGATGAGTGGAATAGCAACTCTAACTAAGGCCATGGCAGATGCTGCGCACCCCGCACTCATTTTGGAGACAAGGAAAACTGCTCCAGGTTTACGTTTGGTGGATAAGTGGGCGGTATTAATTGGTGGAGGGAGGAATCACAGAATGGGTTTATTTGATATGGTTCTTATAAAAGACAATCATATATCAATTGCTGGAGGCGTCACAAATGCCCTCAAATCTGTGGACTCATATTTAGAGAAAAGGAATCTCCAAATGGAGGTTGAGATTGAAACCAGGACACTGGAGGAAATAAAGGACGTATTAGAATATGCTTCTAAAACAAAAACTTCTTTGACTCGGATAATGTTGGATAATATGGTTGTCCCACTACTTAATGGTGATGTTGATGTGTCTATGCTTAAAGAAGCTGTGGAACTGATCAATGGGAAATTTGAGACTGAGGCATCAGGCAATGTCACTCTTGAGACAGTACACAAAATTGGACAAACTGGAGTGACTTACATATCTAGTGGCGCACTGACACATTCTGTGAAAGCACTTGACATCTCCCTCAAAATCGACACGGAGCTTGCGCTTGAAGTTGGAAGGCGGACCAAAAGAGCATAA 846 0.4314 MATIPDDMEVEAHFLAKEDGIVAGIALAEMVFNEVDPSLKVEWSQKDGDYVHKGLKFGKVHGRAHNIVRAERVVLNFMQRMSGIATLTKAMADAAHPALILETRKTAPGLRLVDKWAVLIGGGRNHRMGLFDMVLIKDNHISIAGGVTNALKSVDSYLEKRNLQMEVEIETRTLEEIKDVLEYASKTKTSLTRIMLDNMVVPLLNGDVDVSMLKEAVELINGKFETEASGNVTLETVHKIGQTGVTYISSGALTHSVKALDISLKIDTELALEVGRRTKRA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0468 281 SUPERFAMILY Nicotinate/Quinolinate PRTase N-terminal domain-like 2 83 - -
Vvi1g0468 281 Gene3D - 2 264 IPR037128 GO:0016763
Vvi1g0468 281 NCBIfam carboxylating nicotinate-nucleotide diphosphorylase 2 266 IPR004393 GO:0004514|GO:0009435
Vvi1g0468 281 PANTHER NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] 3 280 IPR027277 -
Vvi1g0468 281 Coils Coil 160 180 - -
Vvi1g0468 281 PIRSF NadC_ModD 1 269 IPR027277 -
Vvi1g0468 281 Pfam Quinolinate phosphoribosyl transferase, N-terminal domain 2 82 IPR022412 GO:0016763
Vvi1g0468 281 Pfam Quinolinate phosphoribosyl transferase, C-terminal domain 84 265 IPR002638 GO:0004514|GO:0009435
Vvi1g0468 281 CDD QPRTase 1 265 IPR004393 GO:0004514|GO:0009435
Vvi1g0468 281 Gene3D Aldolase class I 92 261 IPR013785 -
Vvi1g0468 281 FunFam Nicotinate-nucleotide diphosphorylase (Carboxylating) 1 103 - -
Vvi1g0468 281 SUPERFAMILY Nicotinate/Quinolinate PRTase C-terminal domain-like 84 266 IPR036068 GO:0009435
Vvi1g0468 281 FunFam Nicotinate-nucleotide pyrophosphorylase [carboxylating] 96 256 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g0468 K00767 - vvi:100250945 545.043